| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3225 |
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| Symbol | |
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| ID | 5871010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3613082 |
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| End bp | 3614572 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641548341 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001669453 |
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| Protein GI | 167034222 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC CTAGCAATAC CAACATCAGC GAAGACACAA CGACCGGCAC GATAAGCAAT
GCCACCTTGC TCGACCAGAT CATGGCAGAA ACCAAACTAA TACCCACGCA TGAGGGCTAT
CAGGTTGCCC GGCATGGCGT ATCTGCCTTC ATCGCCGAAA TCCTCAAAAG CAATGACCCG
GATCAGTTGA TCAACAAGCA CCGGGTCGAC CAGATGATTG CAGAGGTTGA CCGGGTACTC
GGCAAACAGA TGGATGCCAT TCTGCATCAT CCAGAGTTCC AGCAGCTTGA ATCTTCATGG
CGCGGCCTGA AAATCCTGGT AGACCGCACC GACTTCAGGG AGAACATCAA GCTCGAAGTG
CTGCATGCGA ACAAAGAAGA CCTGCTCGAT GACTTCGAAA ATGCTGCAGA CATTACCTGC
AGCGGCATTT ACAAACATGT TTATACCGCA GGTTACGGTC AATTCGGGGG CGAGCCGATT
GCGGCCATGG TTGGTAACTA CAGCTTCGGC CCCTCTTCGC CGGATATCAA ACTGCTGAGT
TACATGGCCT CCGTAGGCGC CATGTCTCAC GCACCTTTCC TGGCCGCGCC TTCTCCTGAG
TTCTTCAACT TGAGCAGCTT CGAAGAACTG CCCAATCTCA AGGAAATAAA AGACCTCTTC
GCCGGCCCTC GGCACGCCAA ATGGCGCGCA TTCCGTGAAA GCGAAGACGC CCGTCATGTC
GCTTTGACCG GGCCGCGTTT CATGCTCCGC TCCGCCTACC ACCCGCAGGA AAAACCGATC
GAGAGCTTCA ATTATCACGA AAACATCGCC GGGCAGCATG ACAACTACCT GTGGGGCAAC
TCCACCTTCC TGCTGGCCAG TTGCATCAAT GACAGCTTCG CCCGCTACCG CTGGTGTCCG
AACATCATCG GTCCGCAATC GGGCGGCGCC GTCGAAGACC TGCCAGTCCA TCTGTACGAG
TCCTTGGGCC AGTTGCAGGC CAAGATTCCT ACCGAGGTTC TGATCTCCGA CCGCAAAGAA
TTCGAACTGG CGGAAGAGGG TTTCATCGCC CTGACCATGC GCAAAGACAG CGACAACGCC
GCGTTCTTTT CGGCCAACTC GGTGCAGAAA CCCAAGAACT TCCCGAAAAC CCCCGAGGGG
CTACAGGCAC AGACCAATTA CAAACTGGGT ACCCAGTTGC CCTACCTGTT CATCGTCAAC
CGGCTGGCTC ACTACATCAA GGTGCTACAG CGCGAACAGA TTGGCAGTTG GAAAGAGCGC
CGCGACCTTG AGTCCGAGCT TAACAAGTGG ATCAAGCAGT ACGTCGCGGA CCAGGAGAAC
CCGTCTGCCG ATGTTCGCAG TCGCCGGCCG CTTCGTGCCG CCAAGGTCGA GGTATCGGAT
GTTGCCGGTG ACCCAGGCTG GTACCAGGTT TCGCTCGCTG TTCGCCCACA CTTCAAGTAC
ATGGGCGCGA ATTTCGAAAT TTCCCTGGTC GGACGGCTCG ATACGCAATG A
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| Protein sequence | MPKPSNTNIS EDTTTGTISN ATLLDQIMAE TKLIPTHEGY QVARHGVSAF IAEILKSNDP
DQLINKHRVD QMIAEVDRVL GKQMDAILHH PEFQQLESSW RGLKILVDRT DFRENIKLEV
LHANKEDLLD DFENAADITC SGIYKHVYTA GYGQFGGEPI AAMVGNYSFG PSSPDIKLLS
YMASVGAMSH APFLAAPSPE FFNLSSFEEL PNLKEIKDLF AGPRHAKWRA FRESEDARHV
ALTGPRFMLR SAYHPQEKPI ESFNYHENIA GQHDNYLWGN STFLLASCIN DSFARYRWCP
NIIGPQSGGA VEDLPVHLYE SLGQLQAKIP TEVLISDRKE FELAEEGFIA LTMRKDSDNA
AFFSANSVQK PKNFPKTPEG LQAQTNYKLG TQLPYLFIVN RLAHYIKVLQ REQIGSWKER
RDLESELNKW IKQYVADQEN PSADVRSRRP LRAAKVEVSD VAGDPGWYQV SLAVRPHFKY
MGANFEISLV GRLDTQ
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