Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1074 |
Symbol | |
ID | 5868833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1220692 |
End bp | 1221435 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546173 |
Product | thiol:disulfide interchange protein DsbC |
Protein accession | YP_001667318 |
Protein GI | 167032087 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.211373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTGA CCCAGTTTTT CGCCGCCGCC GCTTTGGCGC TGGCCAGTAC CTTTGCCGTT GCTGCGGCAA CCGATAGCAA CGCCGGGGCC GAGCAGGCCA TCCGTAAATC GTTGCAGAAC CTAGAGCTGG AAGTGCCCGT GGAAAGCGTG GCCAGCAGCC CCCTCAACGG CCTGTATGAA GTCAAGCTGC AGGGCGGTCG CGTGCTCTAC GCCAGCGCCG ACGGCCAGTT CGTGATGCAG GGTTACCTGT TCCAGATCCA GGACGGCAAG CCGGTCAACC TCACCGAGAA GACCGAACGT CAAGGCATCG CCAAGCTCAT CAACGGCATT CCAGCCGCCG AGATGGTGGT TTATCCTGCC AAGGGCGAGA CCAAGTCGCA TATCACCGTG TTCACCGACA CCACCTGCCC GTACTGCCAC AAGCTGCATG CCGAAGTGCC CGAGCTGAAC CGTCGCGGTA TCGAAGTGCG CTATGTCGCG TTCCCGCGTC AGGGCCTCGG CTCGCCGGGT GACCAGCAGT TGCAGGCGGT GTGGTGCTCC AGCGACCGCC GTGGGGCGAT GGACAAAATG GTCGAAGGTG AAGAAATCAA GGCCGCCAAG TGCACCAATC CTGTCAGCAA GCAGTTCCAG CTGGGCCAGT CGATCGGTGT CAATGGCACG CCGGCCATCG TCCTTGAAAG CGGCCAGGTC ATTCCGGGCT ACCAGCCGGC ACCGCAAGTT GCCAAGCTGG CACTTGCCAA GTAA
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Protein sequence | MRVTQFFAAA ALALASTFAV AAATDSNAGA EQAIRKSLQN LELEVPVESV ASSPLNGLYE VKLQGGRVLY ASADGQFVMQ GYLFQIQDGK PVNLTEKTER QGIAKLINGI PAAEMVVYPA KGETKSHITV FTDTTCPYCH KLHAEVPELN RRGIEVRYVA FPRQGLGSPG DQQLQAVWCS SDRRGAMDKM VEGEEIKAAK CTNPVSKQFQ LGQSIGVNGT PAIVLESGQV IPGYQPAPQV AKLALAK
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