Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0112 |
Symbol | |
ID | 5867800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 115798 |
End bp | 116079 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641545185 |
Product | hypothetical protein |
Protein accession | YP_001666364 |
Protein GI | 167031133 |
COG category | [R] General function prediction only |
COG ID | [COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain |
TIGRFAM ID | [TIGR02443] conserved hypothetical metal-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000264551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGG TTGCTGTGAA CAAGACCAAG AAACGCTTTA TTGCCGGGGC GGTATGCCCG GCATGCAGCG AGCCCGACAA GCTGATGATG TGGAATGAAG ACGGCGTGCC GCACCGTGAG TGTGTGGCTT GCGGCTTTAC CGACACCCTC AACGAACAGG GCCTGTCGGT GCCCAAGGAA CTCGGCACGC GGGTCAACAA CCTGGCACCC AAAGCCGCGC CGGCCAAGGT GCAGACGGTG CAGTTCTTCC CTAATCCGAA GCTGAAGAAA CCGACAGAGT AA
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Protein sequence | MSEVAVNKTK KRFIAGAVCP ACSEPDKLMM WNEDGVPHRE CVACGFTDTL NEQGLSVPKE LGTRVNNLAP KAAPAKVQTV QFFPNPKLKK PTE
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