Gene PputGB1_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0112 
Symbol 
ID5867800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp115798 
End bp116079 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content59% 
IMG OID641545185 
Producthypothetical protein 
Protein accessionYP_001666364 
Protein GI167031133 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000264551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAGG TTGCTGTGAA CAAGACCAAG AAACGCTTTA TTGCCGGGGC GGTATGCCCG 
GCATGCAGCG AGCCCGACAA GCTGATGATG TGGAATGAAG ACGGCGTGCC GCACCGTGAG
TGTGTGGCTT GCGGCTTTAC CGACACCCTC AACGAACAGG GCCTGTCGGT GCCCAAGGAA
CTCGGCACGC GGGTCAACAA CCTGGCACCC AAAGCCGCGC CGGCCAAGGT GCAGACGGTG
CAGTTCTTCC CTAATCCGAA GCTGAAGAAA CCGACAGAGT AA
 
Protein sequence
MSEVAVNKTK KRFIAGAVCP ACSEPDKLMM WNEDGVPHRE CVACGFTDTL NEQGLSVPKE 
LGTRVNNLAP KAAPAKVQTV QFFPNPKLKK PTE