| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1452 |
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| Symbol | |
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| ID | 6463556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1523718 |
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| End bp | 1524896 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642727682 |
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| Product | restriction modification system DNA specificity domain |
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| Protein accession | YP_002018323 |
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| Protein GI | 194336529 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0462219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG TTGAACTTCA ACAGGTTACA ACCATAATTG CAGGCCAATC CCCTGAATCG
TCAACATATA ATTCAATTGC CGACGGATTA CCGTTTTTTC AAGGGAAAGC AGATTTTCAG
GATAAATTCC CAAAAGTTCG TATTTGGTGC AACAGCGCTA AGCGTAAAGA GGCCGATCCT
GGCGATATTC TGATGTCTGT TCGTGCCCCC GTTGGATCGG TAAATATTTG TAACCAGAAA
TGCATTATAG GGAGGGGGTT GTCGGCAATC CGACCAGACG CAAATCTAAA TAATTATTTT
CTATACTATT ATCTCAAGTG CAACGAGAAA AATGTTGCCA GTTTAGGAAC AGGTTCGACA
TTTCAAGCAA TAACTCAGAC AACGTTGAAA AGGCTTGACG TGCCCCTTCC GCCGCTTGAC
GACCAAATCC GTAGTGCAAC CCTCCTTTCC AAAGTAGAAA ACCTGATCTT CCGCCGCCGC
GAGCAACTAA AACAGCTTGA CGAACTGCTC AAAAGTGTTT TTCTGGAGAT GTTTGGCGAT
CCGGTCAGGA ATGAGATGGG GTGGGAGATG AAACGTATGG ATGAAATTTC TGATTCCCGG
TTAGGGAAAA TGCGTGACAA AAAGTTCATT ACAGGAAATC ATCTGAGAAA ATATATCGGA
AATTCAAATG TCCAGTGGTT TCGTTTCAAA CTGGATGATT TGGAGGAAAT GGATTTTGAT
GAAAGAGAGC GCGTACTATT TGCTTTGATG GATGGAGATC TGTTGATTTG TGAAGGTGGT
GATATAGGGC GATGTGCAAT ATGGAGAAGT AACTTGTCAG AATGTTATTT TCAGAAAGCC
ATACATCGAG TAAGATTACA CAAATCGCAA GCTATACCTG AATATCTTCA ATATGTGATG
CTGTTCTTTT CGTTATACAA TGGTTTTAAG AATGTTACCT GTAAGGCGAC TATTTCTCAT
TTAACCGGCG AAAAACTTAA AGAAACGCTT ATTCCATTAC CTTCTCTTGA ACTTCAAAAC
CGTTTTTCAA CAATCGTCAA AAAAGTTGAA AAAATCAAGA TCACCTACAC TCACTCTTTT
ATTAATCTCG AATCACTCTA TGGTATTCTC AGCCAAAAAG CATTCAAGGG TGAGCTGGAT
TTTTTGCAGG TTTCGCCTGT TGAGGGAAAC GTGAGCTAA
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| Protein sequence | MKTVELQQVT TIIAGQSPES STYNSIADGL PFFQGKADFQ DKFPKVRIWC NSAKRKEADP
GDILMSVRAP VGSVNICNQK CIIGRGLSAI RPDANLNNYF LYYYLKCNEK NVASLGTGST
FQAITQTTLK RLDVPLPPLD DQIRSATLLS KVENLIFRRR EQLKQLDELL KSVFLEMFGD
PVRNEMGWEM KRMDEISDSR LGKMRDKKFI TGNHLRKYIG NSNVQWFRFK LDDLEEMDFD
ERERVLFALM DGDLLICEGG DIGRCAIWRS NLSECYFQKA IHRVRLHKSQ AIPEYLQYVM
LFFSLYNGFK NVTCKATISH LTGEKLKETL IPLPSLELQN RFSTIVKKVE KIKITYTHSF
INLESLYGIL SQKAFKGELD FLQVSPVEGN VS
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