Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0855 |
Symbol | |
ID | 6461127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 893734 |
End bp | 895245 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727110 |
Product | Peptidase M23 |
Protein accession | YP_002017760 |
Protein GI | 194335966 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTTTA TCGTTCCACC TGCTTTTTTT TATAGAGTAT TGCGCATAGC CAGCGTTCTC TTCTTGCTTG TATCAGTGCT GTCGCCCCCA ACAACGGTAG CATTGCCGAG AAACGGCGAG ATCACAAAGA TCATGAAAGA GCGTGCAGCA GTTGAAAAAA ACCTTTCGAA TCTCAAGCTG CAGCTCCAGG AGTACCAATC AAAACTGAAG TTGACAACAA AAAAAGAGTC ACACTCATTT AAGGCTCTGG AAAATATTCG TAGCCAGATT CTGGTACTTG AAAAGATGAT CAATGAAAAC CAGAGCTATC TCACCAGGCT CGATGGTGAT ATTGACCGTC TTCATGATGA GCTTCAGGGG AATCGCAAGA TTTATGGCAG GGTTTCTGAT GATTTTCGCA GGACGGTGAT ATCAGCATAT AAATATGGTG GAAACAGGGA TATAGAGCAT TTTTTTGCTG CAGGTTCCGT TTCCAAAGCT CTGGTACGCG CGCAATATAT GGGTTTTTTT ACCCGTTCTG TCCGCAGCAA TGTCGAAGAG CTGCAGCAGG TTGCTGCAAA GCTTGAAAAT AGCAGGATTG CGCTTGAGCA GAGCTATCAG CAAAAAGCTA AAGTCGTCAG GGAGCAGGAG CAGCAGTTGA AAAGCTGGTC AGCCAGTAAA AAAGAGAAAG AGGTGGTACT TGACCGGTTA AAGAAAAACA AGCAGGAATA TCTCGCACAG CTTGCAACTG TCCAGCAGAA ACGTATGCAA TTGCAGTCAA GGATAGAGTC ACTCATTCTG GCTGAGCAGC GTGCTCTGGA GGCTGAACGT GAACGGAGAA GAAAAAATCT TGAAGCAAGG CGTCGCAAGA CCCTGCAACT TGAGCAAAAA CGACTTGAGG CCCAACGACT TGAGCAAAAA CAGCCTGAGC AAGAGCACCT TCGGACCGAA CGTCCTGCTG TCGGGCGGGT TCGTGTGAAG AAGAAAAAAA CGGTCGAACA AAGAGTGGCT CCTGATACTG CAAACAAAGC GATGGAAGAG GCCCCGCAGA GAGCCATGAA GAGTCCGGAA AAAGAGCAAG GCAATCAAAC ACTCAATCTG GATTCTCCCG AGTTGGAAGG CGTTTCCGCA AATTTTGACA GAGCATTTGG TTCACTGCCC TGGCCTGTAC AGAATGGTGT CGTCTCCAAA AGGTTTGGAA CGGTAAAAGA CAAGGATCTC AGAATTGTAA CCACCAATAA CGGGATCGAT ATTTCTGTCC CTTCCAACAC GCAGGTAAGG GCTGTTTCTG GTGGCAAGGT AGTCCAGATT GCCTTTCTTC CCACTTTTGG CAATATCGTT ATTGTTCGCC ATCCGCAATC TTATCTTACC GTGTATGCCA ATCTGGGTCA GTTAAGTGTA GCACGAGACG ATATTATCAA GTCGCAGCAA CTGCTTGGAT TCGCCGGAAA AACTGCTGAG GGAGCTTCCG TTGTGCATTT TGAGATATGG AAAGGCCGAG TCAAGCAAAA CCCTTCAAAA TGGCTTAGAT AA
|
Protein sequence | MTFIVPPAFF YRVLRIASVL FLLVSVLSPP TTVALPRNGE ITKIMKERAA VEKNLSNLKL QLQEYQSKLK LTTKKESHSF KALENIRSQI LVLEKMINEN QSYLTRLDGD IDRLHDELQG NRKIYGRVSD DFRRTVISAY KYGGNRDIEH FFAAGSVSKA LVRAQYMGFF TRSVRSNVEE LQQVAAKLEN SRIALEQSYQ QKAKVVREQE QQLKSWSASK KEKEVVLDRL KKNKQEYLAQ LATVQQKRMQ LQSRIESLIL AEQRALEAER ERRRKNLEAR RRKTLQLEQK RLEAQRLEQK QPEQEHLRTE RPAVGRVRVK KKKTVEQRVA PDTANKAMEE APQRAMKSPE KEQGNQTLNL DSPELEGVSA NFDRAFGSLP WPVQNGVVSK RFGTVKDKDL RIVTTNNGID ISVPSNTQVR AVSGGKVVQI AFLPTFGNIV IVRHPQSYLT VYANLGQLSV ARDDIIKSQQ LLGFAGKTAE GASVVHFEIW KGRVKQNPSK WLR
|
| |