| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3899 |
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| Symbol | |
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| ID | 4689963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4162673 |
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| End bp | 4163416 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836917 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_984116 |
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| Protein GI | 121606787 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0449568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0930409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAG CCCTGCCCTT ATCGCCGTCA CCACCGTTAT CGCCGCCCAT TGAACCGCCC
AGCCAGGAAA CGCGCGGGCA GCGTGCTGAC GGCACTAAGG CCCGGCAGAA CCTGCTGCAC
ACCGCGCTCC GGCTGTTTGC CGAAAAAGGC TTCAGCAAGA CATCGACGCG CGAGATTGCC
CTGGCCTCCA GCGCCAACAT TGCCTCGATC AGCTACTACT TCGGCGACAA GGCGGGGCTT
TACCGCGCCG CGTTCACCGA ACCAATGGGC TGCACCGAGG ACCAGCGGGC GCTGTACGAC
CAGCCCGATT TCACTTTGCG GCAATCGCTG CAGGCGTTTA TCGGCAGTTT TTTAGCGCCG
ATGAAACAAG GCGAACTGGT GCAGCAGTGC ACGCGCCTGC ACTTTCGCGA AATGCTGGAG
CCGACCGGCT TGTGGGCCGA GGAAATTGAC AACGACATCA AGCCCGCCCA TGCCGCGCTG
GTGGCGGTGC TGGCCCGGCA CCTGGGGCTC TCAGTGGCGG ACGATGGCCT GCACCGGCTG
GCCTTCAGCA TCACCGGCCT GCCGCTGCAG CTGTTCATCG GGCGCGACTG CGTGCAGGCC
ATCCGGCCCC AGCTGATCGA CCAGCCAGAG GCGATTGACG CCTGGGTGAG CCAGATGGTG
CTGTATGCCG AAGCCATGGT GAACATCGAA GCGGCGCAGC GCCAGCCGCC GCCGGCCTAT
CAGGAACAAC CAGAAAAATC ATGA
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| Protein sequence | MTSALPLSPS PPLSPPIEPP SQETRGQRAD GTKARQNLLH TALRLFAEKG FSKTSTREIA
LASSANIASI SYYFGDKAGL YRAAFTEPMG CTEDQRALYD QPDFTLRQSL QAFIGSFLAP
MKQGELVQQC TRLHFREMLE PTGLWAEEID NDIKPAHAAL VAVLARHLGL SVADDGLHRL
AFSITGLPLQ LFIGRDCVQA IRPQLIDQPE AIDAWVSQMV LYAEAMVNIE AAQRQPPPAY
QEQPEKS
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