Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2963 |
Symbol | |
ID | 4688270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3126737 |
End bp | 3128818 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639835976 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_983183 |
Protein GI | 121605854 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000979868 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000575313 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTTTTT ATGTGCCTGA GCGAGCGTTA GAACTTCTCC GAAAGGGCTC GGGCCGTGCC GATGCCACCT TCCGAGATGA TCAGGCGCAA GCAATTCGTC ATGTTGTTGA AGGCCGAGGC CGCCTGCTGG TTGTGCAAAA GACCGGCTGG GGCAAAAGTT TCGTTTACTT CATCGCCACA AAGTTGCTTC GTGATGCTGG TCAGGGTCCA GTTTTGTTGA TTTCGCCGTT GCTGGCCTTG ATGCGAAATC AGATTGCCGC AGCAAAAAGA ATGGGTTTGC GGGCCGCCAC CATCAATTCT GACAATCTGG AAGACTGGAC TGATGTTGAA GCCAAGCTGG GCAGCGATGA GATTGATATC CTGCTGATTT CACCTGAGCG GCTGGCAAAC GAACGGTTCC GCACACAGGT TCTTGTAGGT ATCGCCGGGC GCATCTCGAT GTTGGTGATT GATGAAGCGC ACTGTATTTC AGACTGGGGG CATGACTTCC GGCCGCACTA TCGGCTGCTG GAGCGCATTG TCAGAACCTT GCCTCCCAAT TTGCGGCTTC TGGCCACTAC CGCAACAGCA AATAACCGGG TGATGGACGA TCTCGCTGCT GTACTGGGTC CGAATCTGGA GGTATCACGC GGTGACCTGA ACCGTACTTC GCTGACGCTG CAAACCATAC GCTTGCCAAG CCAGGCTGAA CGTCTGGCTT GGCTGGCCGA ACAGCTCGCC ACCCTTGAAG GTCACGGCAT CATCTATACG CTGACAGTGC ATGATGCCAA TCAAGTGGCT GATTGGTTAA AAACTCGTGG TTTTAACGTC GAGGCCTACA CAGGTGAAAC AGGTGACCGC CGGGAGGAGC TGGAGCAGGC GTTGCTCAGT AACCAAATCA AGGCACTCGT AGCCACCACG GCCTTGGGGA TGGGGTATGA CAAACCAGAT TTAGCCTTTG TGATTCATTA TCAAATGCCG GGTTCAGTCG TCGCTTACTA CCAGCAGGTG GGCCGCGCAG GACGCGCTCT GGAGTCTGCC TATGGCATTT TGTTGAGCGG CGAAGAGGAG TCGAGAATCG CTGACTGGTT CATAAAAACC GCTTTCCCGA CCCGGCAAGA AGTCGCTGAT GTTCTGGATG CACTTGAAAG GGAACACAAC GGCCTTTCGG TTCCAGAATT GTTGAGCCGA GTCAATCTGA GCAAGGGACG TATCGAAAAG ACACTGGCGC TGCTTTCTCT CGAGTCGCCC GCTCCCATCG CAAAGCAAGA CAGCAAGTGG CAGCTTACAG CGGCAATTCT GAGTGAGGGG TTCTGGGCGC GAGCGGAGCG ACTTACCGCA TTGCGTCGCG GCGAACACCG GCAGATGCAG GCGTATGTCA GCTTGCCGTT TGGCGAGCAT ATGGGTTTTC TTATCCGGGC ACTCGATGGT GATTCGAGTG TTGTGAATCC GCCTGCGCTA ACTCCACTGT CAACCCATGT AAATGATGAC CTTGTGCGGG ACGCTGTGGC TTTTTTGCGT CGCACCAGCT TGCCAATCCA GCCCCGTCTC CAGTGGCCAG CTGGCGGAAT GCCGCTGTCG CATATGAAAG GAAAAATTCC TGAAAATTTA CGAGCCCAGC CTGGGAAAGC GTTATGCACC TGGAATGACG CCGGTTGGGG GCAACTCGTC AAACAGGGCA AATACCGCGA TAGCCACTTT GCAGATAGTC TGGCTGCCGC TTGCGTGAAG ATGATTCACG AGTGGAGCCC GCAACCGACA CCAACCTGGG TGACTTGCGT TCCATCACTG CGCCATCCCG ATTTGGTGCC GAATTTTGCG CAGCGATTGG CGGCTGCGCT GAACTTACCC TTTCACAGAC TACTCCAAAA GACAGACAAC AGGCCCGAAC AAAAGACCAT GGAAAACAGC GCTCAGCAGG CGCGCAACAT TGACGGTTCG CTGGCCCTCA ATGGTCAGGC CGTTCCTGAT GGCCCGGTGC TATTGATTGA CGACATGGTG GATTCGCGCT GGACCTTCAC TGTCGCTGCT TGGCTATTGC GCAAAGGTGG CAGTGGCGAG GTTTGGCCGC TAGCGCTTTC ACAAACGGGG AGTGACCAAT AA
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Protein sequence | MPFYVPERAL ELLRKGSGRA DATFRDDQAQ AIRHVVEGRG RLLVVQKTGW GKSFVYFIAT KLLRDAGQGP VLLISPLLAL MRNQIAAAKR MGLRAATINS DNLEDWTDVE AKLGSDEIDI LLISPERLAN ERFRTQVLVG IAGRISMLVI DEAHCISDWG HDFRPHYRLL ERIVRTLPPN LRLLATTATA NNRVMDDLAA VLGPNLEVSR GDLNRTSLTL QTIRLPSQAE RLAWLAEQLA TLEGHGIIYT LTVHDANQVA DWLKTRGFNV EAYTGETGDR REELEQALLS NQIKALVATT ALGMGYDKPD LAFVIHYQMP GSVVAYYQQV GRAGRALESA YGILLSGEEE SRIADWFIKT AFPTRQEVAD VLDALEREHN GLSVPELLSR VNLSKGRIEK TLALLSLESP APIAKQDSKW QLTAAILSEG FWARAERLTA LRRGEHRQMQ AYVSLPFGEH MGFLIRALDG DSSVVNPPAL TPLSTHVNDD LVRDAVAFLR RTSLPIQPRL QWPAGGMPLS HMKGKIPENL RAQPGKALCT WNDAGWGQLV KQGKYRDSHF ADSLAAACVK MIHEWSPQPT PTWVTCVPSL RHPDLVPNFA QRLAAALNLP FHRLLQKTDN RPEQKTMENS AQQARNIDGS LALNGQAVPD GPVLLIDDMV DSRWTFTVAA WLLRKGGSGE VWPLALSQTG SDQ
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