Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2743 |
Symbol | |
ID | 4688478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2887270 |
End bp | 2887953 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835751 |
Product | HAD family hydrolase |
Protein accession | YP_982966 |
Protein GI | 121605637 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.994994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0511558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAT CACACCCTGC GCCCACCCAT TTCAAAGCCG TGATCTTCGA TTGCGACGGA ACGCTGGTTG ACAGCGAAAC CAGCGGCATG ACCGCGCTGT ACGAAGAAGC CTGCAAGCTC GGTTATTCGC TGCCCCTGGC GCAGGCGCTG GACGGCTTTC GGGGCCGGCA AATGGCGCTG TGCATCGAGA TGATCGAAGC CCATACCGGG CGGCCCGCGC CCGCCGGGTT CATGGCCACG GTGCGCCTGG CCATGGCCGA CAAGTTCCGC ACCGGCATCA CGGCCATGCC CGGCGCGCCG GAGTTGCTGC AAGCGTTGCG CCGGGCCGGG GTGCCCTACT GCATCGCGTC CAACGGGCCG CAGGACAAGA TGGAACTGAC GCTGGGCCTG TCGGGCCTGC AGGGCTATTT TGAAAAGCAT GTGTTCAGCG CCTACGAAGT GGGCCACTGG AAGCCGTCGC CCGAGCTGTT TTTTCACGCC GCGCGCGAAA TGGGCGTTGA AGCGGGCGGC TGCGTGGTGG TCGAAGACAG CCTGCCGGGC ATCGCCGCCG GGCTGGCAGC GGGCATGCGC GTGTATTCGA TGTGCGAGCC CGAAACCGTT CCCGCCGACG TGGCCGCGCA AGTCGTGCAG ATCGGCGGCC TGGCCGACCT ACATGCTGCA TTTAGCTTGA ACAGCGCTGT TTAA
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Protein sequence | MTSSHPAPTH FKAVIFDCDG TLVDSETSGM TALYEEACKL GYSLPLAQAL DGFRGRQMAL CIEMIEAHTG RPAPAGFMAT VRLAMADKFR TGITAMPGAP ELLQALRRAG VPYCIASNGP QDKMELTLGL SGLQGYFEKH VFSAYEVGHW KPSPELFFHA AREMGVEAGG CVVVEDSLPG IAAGLAAGMR VYSMCEPETV PADVAAQVVQ IGGLADLHAA FSLNSAV
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