| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0334 |
|---|
| Symbol | rpsH |
|---|
| ID | 4688162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 335991 |
|---|
| End bp | 336386 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639833326 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_980578 |
|---|
| Protein GI | 121603249 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000103559 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000409506 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA GTGATCCTAT CGCCGACATG CTGACACGCA TCCGCAATGC ACAAATGGTT
GAAAAAGCTG TTGTGCTGGT GCCTTCGTCA AAAGTCAAAG TCGCCATTGC ACAGGTTCTG
AAGGATGAGG GCTACATTGA TGGCTTCTCC GTCAAGGCTA ACGATGGCAA GCCCCAACTG
GAAATCGCCC TGAAGTATTA CGCAGGCCGC CCCGTGATTG AGCGCATCGA GCGCGTCAGC
CGCCCCGGTC TTCGTGTGTA CAAAGGTCAT GGCGCCATTC CCCAGGTCAT GAATGGCCTT
GGTGTGGCAA TTGTCACGAC GCCCCAGGGT GTCATGACCG ATCGCAAAGC ACGCGCTACC
GGTACCGGTG GCGAAGTGTT GTGCTACGTG GCCTAA
|
|---|
| Protein sequence | MSMSDPIADM LTRIRNAQMV EKAVVLVPSS KVKVAIAQVL KDEGYIDGFS VKANDGKPQL
EIALKYYAGR PVIERIERVS RPGLRVYKGH GAIPQVMNGL GVAIVTTPQG VMTDRKARAT
GTGGEVLCYV A
|
|---|
| |