| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4500 |
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| Symbol | |
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| ID | 5106958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4934341 |
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| End bp | 4935387 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640505771 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001189979 |
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| Protein GI | 146309514 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGC TCGTTTCTAT CGCGTCCATG CTATTCGCAT CACTGTGTTT CTCCTCGCTG
GCACTGGCCC AGGAAACCTA CAAGGTCGCC TGGACCATCT ACGCCGGCAG CATGCCTCTT
GGCTATGCCC AGGATCACGG CATCCTGCAG AAATGGGGCG ACAAGTACGG CTTCAAGCTC
GAAGCCGTGC AGATAAACGA TTACATCGAG GCGCAGACCC AGTTCTCCAT GGGCCAGTTC
GCCGCCACCA TCGCCATGTC GCTGGATGCC CTGACCATTC CGGCGGCCTC CGGTACCGAC
ACCACGGTGG TCATGCCGCT CAGCTCATCA ATGGGCAGCG ACGGCATCGT TCTGCGTGGC
AAGGACAAGA CTCTTGCCGA TCTCAAGGGC CAGACCATCA ACCTCGTCGA GCTGTCCGGT
TCGCACTACA TGCTGGTTCG GGCACTGGAT CAACTCGGCT TGAAAGAAAC CGACGTCAAA
CTGGTCAACA CTTCGGACAG CGACATGGCG GCGGTTTTCT TCGACCCCGC GACCATGGCT
GCGGCAACCT GGAAACCACA GTTGAGCGAA ATCCTCGCGC AAGGCGATGA CCTCTCCCTG
GTCTTCGATT CCTCAAAGAT TCCCGGCGAG CTGGTCGACG TCATGGCGGT CAACAGCGAA
CTGCTGCGCC GTGAGCCCAA CCTCGGTAAG GCCCTGGCCG GCGCCTGGTT CGAAACCCTG
GCGATGCTGC AGCCCGATCA CCCGCAACAC GCCGACTTGA TGGACTACAT GGCGCAGGCC
CTGAGCACCA CGCCGGAAGG ACTTGCCGAC CAGCTTTCCA CCATCGATTT CTTCGCCCCG
GCGCAGGGCC TCGGCTACGT CAACTCGGCC GCCTTCAAGA ACAAGATGAC CGAGATGACG
CGCTTCGCCT TCCAGCACGG CCTGTTCGAG GGTGCCAAGG ATGCCGGCTA TGTCGGTATC
GAAGCCGGTG ACGGACAGAT CCTGGGCAGT GCCGACAACG TCAAACTGCG CTTCGCCTCC
ACCTGGCTCA ACGAGGTGCA GCAATGA
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| Protein sequence | MARLVSIASM LFASLCFSSL ALAQETYKVA WTIYAGSMPL GYAQDHGILQ KWGDKYGFKL
EAVQINDYIE AQTQFSMGQF AATIAMSLDA LTIPAASGTD TTVVMPLSSS MGSDGIVLRG
KDKTLADLKG QTINLVELSG SHYMLVRALD QLGLKETDVK LVNTSDSDMA AVFFDPATMA
AATWKPQLSE ILAQGDDLSL VFDSSKIPGE LVDVMAVNSE LLRREPNLGK ALAGAWFETL
AMLQPDHPQH ADLMDYMAQA LSTTPEGLAD QLSTIDFFAP AQGLGYVNSA AFKNKMTEMT
RFAFQHGLFE GAKDAGYVGI EAGDGQILGS ADNVKLRFAS TWLNEVQQ
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