Gene Pmen_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2531 
Symbol 
ID5107998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2791850 
End bp2792548 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640503775 
Productphosphoglycerate mutase 
Protein accessionYP_001188019 
Protein GI146307554 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.186608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.226457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGCA TTTACCTGAT TCGACATGGC CAGGCTTCAT TCGGTGCAGA CGACTACGAT 
GTCCTGTCTC CCGTCGGTGT GCGCCAGGCC GAAGTACTGG GCGAGCACCT CAGCCAGCTC
GGTATCGTCT TCGACCGCTG CGTCAGCGGC AGCCTGCGCC GCCAGCAGCA TACCGCCAAT
GCCGCACTGC AGCGCATGAG CGACGCTCCG GCGCTGGATA TCGACGAAGC CTTCAACGAG
TTCGATGCCG ACGCGGTGAT CCGCACCCTG CTCCCCGATC TGCTGCCGGA AGAACCCGAA
GCCCTGCACA TCCTGCGTAA CGGCGCGCAG AACCGCGCCG AATTCCAGCG CCTGTTCGCC
AAGCTGATCC AGCGCTGGGT CTCCGGCGAA CACGACAAAC CCGGCCTGCA GAGCTGGCAG
GCCTATGTCG AGCAGGTCGA GGGCGGCCTG CGGCGCATTC TCGAACAGGC CCAGAGCAAA
CAGAACATCG CCGTATTCAC CTCCGGCGGC ACCATCACCG CCCTGCTGCG CCTAGTCACC
GGCGTACCGG CGCACAAAGC TTTCGAACTG AATTGGCAAA TCGTCAACAC CTCGCTCAGC
CAGCTGAAGT TTCGTGGCAA CGAGGTGAGT CTGGCTTCCT TCAACAGCCA TGTGCATTTA
CAGCTGCTGA AGGCGCCGGA GCTCATTACC TACCGGTGA
 
Protein sequence
MGSIYLIRHG QASFGADDYD VLSPVGVRQA EVLGEHLSQL GIVFDRCVSG SLRRQQHTAN 
AALQRMSDAP ALDIDEAFNE FDADAVIRTL LPDLLPEEPE ALHILRNGAQ NRAEFQRLFA
KLIQRWVSGE HDKPGLQSWQ AYVEQVEGGL RRILEQAQSK QNIAVFTSGG TITALLRLVT
GVPAHKAFEL NWQIVNTSLS QLKFRGNEVS LASFNSHVHL QLLKAPELIT YR