| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1976 |
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| Symbol | thrS |
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| ID | 5106579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2175406 |
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| End bp | 2177328 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503211 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001187469 |
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| Protein GI | 146307004 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.30647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0664699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA TTACTCTTCC CGACGGCAGT CAGCGTTCGT TCGATCATCC GGTATCCGTG
CTGGAGGTTG CTCAATCCAT TGGTGCAGGT CTGGCCAAGG CCACCCTGGC CGGCAAGGTA
AACGGCAAGC AGGTCGATGC CTGCGACGTT ATCGATACCG ACGCCACCCT GCAGATCATC
ACGCCGAAGG ACGAAGAGGG GCTGGAAATC ATCCGCCACT CCTGTGCTCA CCTGGTTGGG
CATGCGGTCA AGCAGCTGTA CCCGAACGCC AAGATGGTGA TCGGCCCGGT CATCGATGAA
GGCTTCTATT ACGACATTGC CATCGACCGT CCCTTTACGC CGGATGACAT GGCGGCCATC
GAGAAGCGCA TGGCCGAGCT GATCGACAAG GACTACGACG TCATCAAGAA GATGACGCCG
CGTGCCGAGG TCATCGAGCT GTTCAGGTCG CGTGGCGAGG AGTACAAACT GCGTCTGATC
GACGACATGC CGGACGAAAA GGCCATGGGC CTGTACTTTC ATGAAGAGTA CGTCGACATG
TGCCGCGGTC CGCACGTGCC CAATACCCGC TTCCTCAAGG CCTTCAAGCT GACCCGCATT
TCCGGTGCCT ACTGGCGCGG CGACTCGAAG AACGAGCAGC TGCAGCGCAT CTATGGCACT
GCCTGGGCGG ACAAGAAGCA GCTGGCTGCC TATATCCAGC GCATCGAGGA GGCCGAGAAG
CGCGATCACC GTCGCATCGG CAAGCAGCTC GACCTGTTCC ATCTGCAGGA GGAAGCGCCG
GGCATGGTGT TCTGGCATCC CAATGGTTGG ACCGTCTACC AGGTGCTGGA GCAATACATG
CGCCAGGTGC AGCGCGAGAA TGGCTATGTG GAAGTGCGCA CCCCGCAGGT GGTCGATCGC
ATTCTCTGGG AGCGCTCCGG CCACTGGTCC AACTACGCCG AGAACATGTT CACCACGGCT
TCGGAAAATC GCGATTACGC GGTCAAGCCG ATGAACTGCC CGTGCCACGT GCAGATCTTC
AACCAGGGTC TGAAATCCTA CCGCGACCTG CCGCTGCGTC TGGCCGAGTT CGGTGCCTGC
CACCGCAACG AGCCGTCCGG CGCGCTGCAC GGCATCATGC GCGTGCGCGG CTTCGTCCAG
GACGATGCGC ACATCTTCTG CACCGAAGAT CAGGTGAAGA AGGAAGCGGC CGATTTCATC
AAGCTGACCC TGCAGGTCTA TGCCGACTTC GGTTTCACCG ATATCGCCAT GAAGCTTTCG
ACTCGTCCGG CCAAGCGCGT GGGTTCCGAA GAGCTGTGGG ATCGCGCCGA GGGTGCGTTG
GCCGATGCGC TGAACGAGTC CGGCCTGGCC TGGGAGTATC AGCCGGGCGA GGGCGCCTTC
TATGGTCCGA AGATCGAATT CACCCTGCGT GACTGCCTGG GTCGCAACTG GCAGTGCGGT
ACGCTGCAGT ACGATCCGAA CCTGCCGGAG CGTCTGGACG CCAGCTATAT CGCCGAAGAC
AACAACCGCA AGCGCCCGGT CATGCTGCAC CGCGCGATTC TCGGTTCGTT CGAGCGTTTC
ATCGGCATGC TGATCGAGCA CTACGCCGGT TCCTTCCCGG CCTGGCTCGC GCCGACCCAG
GCGGTGATCA TGAATATCAC CGACAAGCAG GCCGATTTTG CCCGCGAAGC GGAGAAAACT
CTCAATCAAA GCGGTTTTCG TGCCAAGGTC GACTTGAGAA ACGAAAAGAT CGGCTTTAAA
ATCCGCGAGC ATACCTTGCT CAAGGTTCCC TATCTCTTGG TTATTGGAGA TCGGGAAGTC
GAGACACGAT CCGTTGCTGT GCGCACCCGC GAAGGCGTAG ACCTAGGGTC AATGCCTCTC
GAGCAGTTCG CCGCGCAGTT GCAGCAAGCG GTTTCCCGGC GTGGTCGCCA AGATTTGGAG
TAA
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| Protein sequence | MPTITLPDGS QRSFDHPVSV LEVAQSIGAG LAKATLAGKV NGKQVDACDV IDTDATLQII
TPKDEEGLEI IRHSCAHLVG HAVKQLYPNA KMVIGPVIDE GFYYDIAIDR PFTPDDMAAI
EKRMAELIDK DYDVIKKMTP RAEVIELFRS RGEEYKLRLI DDMPDEKAMG LYFHEEYVDM
CRGPHVPNTR FLKAFKLTRI SGAYWRGDSK NEQLQRIYGT AWADKKQLAA YIQRIEEAEK
RDHRRIGKQL DLFHLQEEAP GMVFWHPNGW TVYQVLEQYM RQVQRENGYV EVRTPQVVDR
ILWERSGHWS NYAENMFTTA SENRDYAVKP MNCPCHVQIF NQGLKSYRDL PLRLAEFGAC
HRNEPSGALH GIMRVRGFVQ DDAHIFCTED QVKKEAADFI KLTLQVYADF GFTDIAMKLS
TRPAKRVGSE ELWDRAEGAL ADALNESGLA WEYQPGEGAF YGPKIEFTLR DCLGRNWQCG
TLQYDPNLPE RLDASYIAED NNRKRPVMLH RAILGSFERF IGMLIEHYAG SFPAWLAPTQ
AVIMNITDKQ ADFAREAEKT LNQSGFRAKV DLRNEKIGFK IREHTLLKVP YLLVIGDREV
ETRSVAVRTR EGVDLGSMPL EQFAAQLQQA VSRRGRQDLE
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