Gene Pmen_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1570 
Symbol 
ID5109228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1729827 
End bp1730192 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content62% 
IMG OID640502798 
Productresponse regulator receiver protein 
Protein accessionYP_001187066 
Protein GI146306601 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.945276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCATTCTGAT AGTCGACGAC TCCCTCTCCA TGCGTCAGCT GGTGAAGATG 
ACCCTTTCCG GCGCCGGCCA CACCGTCATC GAGGCGGTGG ACGGGCGCGA CGCCCTGAGC
AAGCTCAACG GACAGAAGAT CAACCTGATC ATCAGCGACG TGAACATGCC CAACCTCGAC
GGCATCGGCC TGGTCAAGGA AGTGAAGGCG CGCAACGAAT ACCGCTTCAC CCCCATCGTC
ATGCTCACCA CCGAGAGCGA ACAGGGCAAG AAAGCCGAAG GCCAGGCCGC CGGTGCCAAG
GCCTGGATCG TCAAGCCGTT CCAGCCGCAG CAACTGCTGG CGGCCGTCGA CAAGCTGGCC
AGCTGA
 
Protein sequence
MAKTILIVDD SLSMRQLVKM TLSGAGHTVI EAVDGRDALS KLNGQKINLI ISDVNMPNLD 
GIGLVKEVKA RNEYRFTPIV MLTTESEQGK KAEGQAAGAK AWIVKPFQPQ QLLAAVDKLA
S