Gene Plut_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlut_0092 
Symbol 
ID3744863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium luteolum DSM 273 
KingdomBacteria 
Replicon accessionNC_007512 
Strand
Start bp97111 
End bp97671 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID637768120 
ProductTPR repeat-containing protein 
Protein accessionYP_374025 
Protein GI78185982 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCCTGCTATC CCTCGCCTTG ACCGCTATCG TGGCGATGGG CTTGGCCTCG 
CCAGCTGCAG CCGAGTCCGC AAACAACTGG TTTGACCGCG GGTTCGACTG CCAGATTCAG
GGTGACATTA AAAACGCCCT GGAGCATTAC ACGAAAGCCA TCGAAATCGA CCCGGCTTTC
GCCATGGCCT ACCAGATGCG GGGAGCCGCC AACCAGAAGC TAAAGAAATA CCAGCAGGCA
CTCAGCGACT ACTCCATGGT CATCAACTGC GGCGAGACCA ACTTCAGGGC TGTTGGGTAC
TACAACCGGG GAATCGTCAA AAACATGACC GGCGACTTCT CGGGTGCCAC CGCGGATTTC
TCACAAGCCA TTGCACTCGA CGGAAAAATG GCTCCAGCCT TTTTCCACCG GGCCATCGCC
CGAAGCAAAA CCGGAGACTT CCCCGGCCGA CAGGAGGATT TCCGGCAGGC CGCGCGTCTC
GGCGACCTGA ACGCCGAAGC CTGGCTGAAC ACCTACTGCC CAGGCTGGAG GGAGATGCCA
CTGGCCGGCG GCCCGTCGTA G
 
Protein sequence
MKKILLSLAL TAIVAMGLAS PAAAESANNW FDRGFDCQIQ GDIKNALEHY TKAIEIDPAF 
AMAYQMRGAA NQKLKKYQQA LSDYSMVINC GETNFRAVGY YNRGIVKNMT GDFSGATADF
SQAIALDGKM APAFFHRAIA RSKTGDFPGR QEDFRQAARL GDLNAEAWLN TYCPGWREMP
LAGGPS