| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plut_0005 |
|---|
| Symbol | |
|---|
| ID | 3745711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium luteolum DSM 273 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007512 |
|---|
| Strand | - |
|---|
| Start bp | 4402 |
|---|
| End bp | 6780 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637768033 |
|---|
| Product | DNA-directed DNA polymerase B |
|---|
| Protein accession | YP_373940 |
|---|
| Protein GI | 78185897 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.775002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.276245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAA TTATCAGTGA CATTCTGAAA AATGAACTGC TCTTCGGCAA AGACAAAGAG
GAGCGGATAG TCGGTGCATA CCCGATCTCA GATACGCATA TCCGGCTGTT CAATCGCACG
AATGAAGGCG TCACATCGCA TGACGAACCG CTCTATCCAT TTTTTTTCTT GACCGACGCA
ATCCTTCTTG AAGGCTATAT CCCTGTGGAC GGGAGCAAAT ATTGGCTGAT CAAGCTTGAC
GGGGATAACC ATTATCGCAG CCTGGCGATA TTCAGAAACC TGAAAAGCTC TCGCGGAGCA
TTGGATCATC TTGCAGGAAA GAAGCCTGAT GCACAAGATA ATAGAGGGAT AGACGCCGGT
GAAGGAGGAC TGGAAGTCAT TCAGAATGTA TACAGTCGGG GAGATGGGGT TACCCAGTAC
ATGATGCAGA CCGGAAAGAC ATTCTTCAAA GGAATGATAT TCGACGAGCT CTACAGGATG
CAGCTTGACA TAGAAACCCT GTATGATCCG GCCAAACCGC CAAAGAAGGG TCGCGGAATC
GGTGAAGATG AGATCATCAT CATTTCGATG TCAGACAATC GCGGATGGGA GATGGCCATC
CACTCGCGTG ACCGTAGCGA GAAAGAGCTT CTTCGGGAGA TGGTCAGAAT CATCACAGAG
AAAGATCCAG ACGTGATTGA AGGACACAAC ATCTTCAGTT TCGATCTACC CTATATACAG
GCTCGTTGTG AACTACACCG CGTTCCTTTC GCCATAGGAA GGAATGGCAC CTTGCCGAAA
TCCTACCCCG CAAGCATCCG CTTTGCCGAA CGCAGCATTG ATTACCCTTT TTATGACATT
CCGGGACGCC ACGTCATCGA CACGCTCTTC CTTGTCCAAA GCTATGATAT TACAAAACGT
TCGATGCAGA GTTATGGACT GAAAGCTGTT GCCAGGCACT TCGGATTTGC TTCGGAAAAC
AGGACCTATG TGGAGTACAG CGATATTGCC GAAATGTGGC GGACGAGGGA CGACAGACTC
CTGGCCTATG CTCTGGATGA CGTTCGTGAG ACCAGGGAAC TCTCCACCCT TCTTTCCGGA
AGCAGCTTTT ACCTCTCACA GATGCTCCCC TACACCTATG CAATGACTGC AAGAATCGGA
CAGGCGGCAA AAATCGAAGC TCTGTTCATC AGGGAATATC TCCGCCTCAA ACATTCCGTC
CCCCGTCCGA CACTTGGTCA GCAGCATGCG GGAGGCTATA CCGAGGTGTT CAGGAAAGGG
GTGCTGGGGC CGATCGTCTA TGCTGACGTG GAGTCGCTAT ACCCGTCGAT TATGCTCTCG
TACGGAGTCT GCCCCAAAAG TGACAGTTTG AAAGTCTTTC CGGGCGTACT GGGTGACCTG
CGAGAACTCA GGCTGAAAGC CAAGGCCCTT GCCGGTGAAG AAAAGAGAAT GGGCAATACT
TCGCTGGCTG CAAATTACGA TGCCATGCAG GGATCGTTCA AGATCCTCAT CAACGCAATG
TACGGGTATC TCGGATTCAG CGGCGGCCTG TTCAACGATT TTGATGAGGC CGACAGGGTG
ACGTCCACCG GACAGTCCAT CGCAAAGAAA ATGATCCGTG AATTCGAATC GAGAGGATGC
AGGATCATCG AAGTCGATAC TGACGGAATT CTCTTCATTC CTCCCGACTC CGTCAAGAGT
GAGGCAGAAG AACGGGCCCT GGTTCAGGAT GTCTCTGAAC TGATGCCCGA TGGCATCAAC
ATCGGTTTTG ACGGTCGGTT CCGAAAAATG ATTTCCTACC TGAAAAAAAA CTATGCGTTG
CTGGACTATA ACGGCATAAT GAAAATGAAA GGTTCTTCAC TGACCAGCCG TAGTGGTGAG
AAGTTTGGAA GGGATTTCAT AAGAAGGGGA TTTGAACAGC TCCTTGCCGA GGATATCACG
GGACTTCACG ACCTCTACCG TGAGTACAGA AACAAGATCC TGAACCACGG ACTGGATATT
ACTGATTTTT CACGCACCGA GAGCATGAAG AGTTCTCTTG AGCAGTACCG GGAAGATGTA
GCATCAGGAA AACGCTCAAA ATCGATCACG TACGAAACCG CCATCCGCTC CGCCATCATG
GTAACGAAAG GCGACCGGAT CACCTACTAC ATCGCAGGAA CTGGACAGGG CGGAGCAGCG
AGCGACCGAG GGAAACCAGC TGCGGAATGG AGCAGGGATA AACCGGATGA AAATACCTCC
TTCTATCTGA AACGGCTGGA TGAATACTGC CAGAAATTCA TACCTTTCTT TAAACCGCAG
GATTACAGCT CTATATTTTC AGATGACACC CTGTTCTCAT TTTCTCCAGA AGGCATTGAG
CTTCAGGAAC TGATCCTTTC GCCCGGAGAA GGGGATTAA
|
|---|
| Protein sequence | MDTIISDILK NELLFGKDKE ERIVGAYPIS DTHIRLFNRT NEGVTSHDEP LYPFFFLTDA
ILLEGYIPVD GSKYWLIKLD GDNHYRSLAI FRNLKSSRGA LDHLAGKKPD AQDNRGIDAG
EGGLEVIQNV YSRGDGVTQY MMQTGKTFFK GMIFDELYRM QLDIETLYDP AKPPKKGRGI
GEDEIIIISM SDNRGWEMAI HSRDRSEKEL LREMVRIITE KDPDVIEGHN IFSFDLPYIQ
ARCELHRVPF AIGRNGTLPK SYPASIRFAE RSIDYPFYDI PGRHVIDTLF LVQSYDITKR
SMQSYGLKAV ARHFGFASEN RTYVEYSDIA EMWRTRDDRL LAYALDDVRE TRELSTLLSG
SSFYLSQMLP YTYAMTARIG QAAKIEALFI REYLRLKHSV PRPTLGQQHA GGYTEVFRKG
VLGPIVYADV ESLYPSIMLS YGVCPKSDSL KVFPGVLGDL RELRLKAKAL AGEEKRMGNT
SLAANYDAMQ GSFKILINAM YGYLGFSGGL FNDFDEADRV TSTGQSIAKK MIREFESRGC
RIIEVDTDGI LFIPPDSVKS EAEERALVQD VSELMPDGIN IGFDGRFRKM ISYLKKNYAL
LDYNGIMKMK GSSLTSRSGE KFGRDFIRRG FEQLLAEDIT GLHDLYREYR NKILNHGLDI
TDFSRTESMK SSLEQYREDV ASGKRSKSIT YETAIRSAIM VTKGDRITYY IAGTGQGGAA
SDRGKPAAEW SRDKPDENTS FYLKRLDEYC QKFIPFFKPQ DYSSIFSDDT LFSFSPEGIE
LQELILSPGE GD
|
|---|
| |