| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2886 |
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| Symbol | |
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| ID | 9139598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3736901 |
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| End bp | 3740098 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003630907 |
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| Protein GI | 296123129 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.418369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCTCCC GATTTTTTAT TGATCGTCCC ATTTTCGCCA ACGTCATTGC CATTGTCACA
ATGATTCTTG GCGGCGTGGC TTTGTTTCGA CTTCCTGTTG AGCAGTATCC CTCTATCACA
CCACCCACGG TTCAGGTGAC GGCGACCTAT CCCGGTGCCA ATGCTCAGGT GCTGTCAGAT
ACCGTCGCTG CGCCCATCGA ACAGCAGGTG AATGGTGTCG AAGGCATGCT CTACATGTCT
TCGACATGTG CCAGTGATGG CACCTACACT CTGACGGTCA CGTTTGAAGT GGGGGCCAAT
CTCGATATGG CGCAGGTGCT GGTACAGAAC CGCGTCTCTC AAGCGGAGCC GAGACTTCCT
GAGGATGTTC GCCGCCAGGG GATCAACGTC AAGAAACAGT CCACAGCCAT TATTCAGGTG
GTGACGCTGA CCAGCGATGA GGGGAAGTTT GATAGTCTCT ATCTGTCGAA CTATGCCACC
TTATCGATTC GCGATGAGTT GGCCCGTATT TATGGTGTCG GCGAAATTCA GGTCTTCGGC
TCCAGCGATT ACGGGATGCG TGTCTGGCTC GACCCCAACA AACTCAAGGC ACGCAATCTT
TCGGCCTCTG ATGTCGTGGC TGCCATTCAA GAACAGAACG TCCAGGTGGC AGCCGGTCAA
TTGGGGGCTG CTCCTGCGCC AGTGGGGCAG GATTTTGAAT ATACAATTAC CACACTGGGT
CGATTGAGCG ATGTCGAAGC CTTTAACGAC ATTATCGTCA AGACGGCACC AGGGAATGGT
GGCCGCCTGA CGCGTGTGCG AGATGTGGCC CGCGTGGAAC TGGGCGGGCA GCTCTATAAC
CTATATTGCG AGAAGAGCGG GATTCCCGCT GCCGGCCTGG CGATCTTCCA GCTTCCCGGG
GCGAACTCCC TTAATGTGGC CCATGACGTG AAGAAAGTCA TGGCGAAACT GGAGAAGGAC
TTCCCCAAGG GGCTCAACTA CGACATTCCG TTCGATACGA CCAAGTTCGT CGAAGAGGCC
ATTGCCGAAG TCTATAAAAC GCTGTTTGAA GCAGGCGTTC TGGTGTTGAT TGTAATTCTG
GTCTTCCTCC AGGATTGGCG GGCCGTGCTG GTCCCAGCGA CCACTGTACC CGTGACGATC
ATTGGTGCCT TTGCCCTTAT GTGGGCCATG GGCTTTTCTG TCAATATGCT GACGCTGTTC
GGACTGGTGC TGGCGATTGG GATCGTTGTC GATGATGCCA TTGTGATCGT CGAAAACGCG
GCCCATCACA TCGAGCACGA CCATCTGGCA CCGCGCGAAG CGACGATTGT GGCGATGGGG
GAAATTCTGG GGCCGATTAT TGGCATTACG TTAGTGCTGA TGGCGGTCTT CCTCCCCACA
GCCGGTATGC AGGGGATTAC CGGCCAGCTT TATCGTCAGT TCGCGTTAAC GATCGCGGCG
ACTGCGCTGA TCAGTGCGGT GAATGCACTG ACATTAAAAC CAGCTCAATG TGCGGTGTAC
CTCAGGCCTG TCGCTCCTAA AAAGAATATT TTCTATCGCG GGTTTAATGC TGTTTATGAT
TTCTTTGAAG GTATCTACGT CAGTATTGTC AAGGTGCTGG TGCGAGCACC ACTTTTTTCG
ATGATTGCCT ATCTAGCAAT TGTGACCAGC ACGGTTTTGC TCTTCCGCAG TTTGCCGACA
GGCTTTCTGC CGACGGAAGA TCAGGGCTAT CTGGTTGTGG GTTGCCAATT GCCCGATGGG
GCTTCTCAAG AGCGAACTAA GGCTGTGCTC CAGAAGATGA ACAAGATTCT GGGGAGTACA
CCCGGCATTG AAAACTGGGT GACGATTGGT GGTCAATCGC TGCTTGATCA GGCCGCTTCG
TCCAATGCCG CCACGATCTA CGTCACGTTG AAAGAGTGGA GCCATCGTCA GTCGCCACAG
GAAAGTTTGT TCGGCGTCCT GGGTTCACTA TATGCCCAGT TCGCGACGAT TGATGACGCG
ATTACCTTTG CCTTCCCACC GCCGGCTATT TTAGGTTTAG GTACGGCTGG TGGATTCGAA
ATGCAGTTGC AGGATCGTGG TGGAGCCGGA TTGGTTCAAC TGCAGAATAT GGCGCAGATC
ATTTCGGCTG ATGCCAATCA GCAGACAGCG CTGACGCAGG TGAACAGCAC CTTCCGTGCA
CAGATCCCAC AGATCTATTT GGATATCGAC CGCGTGAAGG CCAAATCGCT CGATGTTCCG
CTGGCTGAAA TTTTTGGAAC ATTGCAGGCA GAACTCGGTT CAGCTTATGT GAACGATTTC
AATCTGTTTG GCCGAACCTA TCAGGTCCGT ATCCAAGCGG ATGCTCAATA CCGCGTGGAA
AAAACAGATA TCACTCGACT GCAGGTGCGT AATCGAGCCG GGCAGATGGT TCCTTTGGGC
TCACTGGTGG AAGTGCGCGA TTCGTTAGGG CCACAGATCA TCCGCCGATA TAACCTCTAT
CCGGCAGCAG CGATTAACGG TCAGGCGGCT CCCGGATTCA GCTCAGGTCA GGCACTCGAT
ATCATGGAGC AGATGACCAA GCGACTACTC CCAAAAACGA TGGGCTTTGA ATGGACCGGG
ATTTCCTATC AGGAACGTAA AGTCGGGAAT GAATCCGTTT ATGTTCTGGG GCTCGCCGTG
CTCTTGGTGT ACCTGGTGCT GGCCGCTCAG TACGAAAGCT GGACGAGTCC AGCGGCTGTG
ATTCTCGTGG TCCCTTTGGG CCTGGTTGGT TCGGGACTGG CACTTCTGGC GCGCGGGATG
GACAATAACG TCTATACTCA GATCGGGCTG GTACTGATCA TTGCTCTGGC AAGTAAGAAT
GCGATTCTGA TTGTCGAGTT TGCCCGTGAT TTGAGGCATA AAGGGGCCAG TATTCTCGAT
GCGGCTGTCA ATGCTTCGCG ACTGCGCTTT CGCCCGATTC TGATGACTTC GTTTGCGTTT
ATTCTCGGGG TCTACCCACT GGTGGTGGCC CAGGGGGCTG GAGCGGCCAG TCGTCAGGCT
TTAGGGACAG CTGTCTTTGG AGGGATGATT ACCTCAACCA TACTCGCGGT CTTCTTTACG
CCGGTCTTTT ATGTGGTGAT GCAGAGTTTG AGTGAAGGCT ATGCCCGTTT GCGAGGAAAA
CCCGTCCGCA CTGGCCCACC ATCAACCGAA GCTGCCCAGC CTGCCGCGAC TCACGACCAG
CAGCCGGCGA GCCACTGA
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| Protein sequence | MLSRFFIDRP IFANVIAIVT MILGGVALFR LPVEQYPSIT PPTVQVTATY PGANAQVLSD
TVAAPIEQQV NGVEGMLYMS STCASDGTYT LTVTFEVGAN LDMAQVLVQN RVSQAEPRLP
EDVRRQGINV KKQSTAIIQV VTLTSDEGKF DSLYLSNYAT LSIRDELARI YGVGEIQVFG
SSDYGMRVWL DPNKLKARNL SASDVVAAIQ EQNVQVAAGQ LGAAPAPVGQ DFEYTITTLG
RLSDVEAFND IIVKTAPGNG GRLTRVRDVA RVELGGQLYN LYCEKSGIPA AGLAIFQLPG
ANSLNVAHDV KKVMAKLEKD FPKGLNYDIP FDTTKFVEEA IAEVYKTLFE AGVLVLIVIL
VFLQDWRAVL VPATTVPVTI IGAFALMWAM GFSVNMLTLF GLVLAIGIVV DDAIVIVENA
AHHIEHDHLA PREATIVAMG EILGPIIGIT LVLMAVFLPT AGMQGITGQL YRQFALTIAA
TALISAVNAL TLKPAQCAVY LRPVAPKKNI FYRGFNAVYD FFEGIYVSIV KVLVRAPLFS
MIAYLAIVTS TVLLFRSLPT GFLPTEDQGY LVVGCQLPDG ASQERTKAVL QKMNKILGST
PGIENWVTIG GQSLLDQAAS SNAATIYVTL KEWSHRQSPQ ESLFGVLGSL YAQFATIDDA
ITFAFPPPAI LGLGTAGGFE MQLQDRGGAG LVQLQNMAQI ISADANQQTA LTQVNSTFRA
QIPQIYLDID RVKAKSLDVP LAEIFGTLQA ELGSAYVNDF NLFGRTYQVR IQADAQYRVE
KTDITRLQVR NRAGQMVPLG SLVEVRDSLG PQIIRRYNLY PAAAINGQAA PGFSSGQALD
IMEQMTKRLL PKTMGFEWTG ISYQERKVGN ESVYVLGLAV LLVYLVLAAQ YESWTSPAAV
ILVVPLGLVG SGLALLARGM DNNVYTQIGL VLIIALASKN AILIVEFARD LRHKGASILD
AAVNASRLRF RPILMTSFAF ILGVYPLVVA QGAGAASRQA LGTAVFGGMI TSTILAVFFT
PVFYVVMQSL SEGYARLRGK PVRTGPPSTE AAQPAATHDQ QPASH
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