Gene Plim_1055 details

Gene Information

• Locus tag: Plim_1055
• ID: 9137741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1337283
• End bp: 1340771
• Gene Length: 3489 bp
• Protein Length: 1162 aa
• Translation table: 11
• GC content: 53%
• Product: glycosyl transferase family 2
• Protein accession: YP_003629094
• Protein GI: 296121316

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.289988
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTC AGCGTGTGGC TGTCGTCTTC GATAATCGTC CCCGTCCAGA GACGACGGGA 
ACGTACCTCC TGCGGGCGAT TCAATCACTC CTGCCACAGA CGGTGCACCT CCTTCCCGAT 
CAGCTTTCGA CACTTTCCCC AAAAAGTTTT GATGGCTACG TCTGGGTCGA TGATGGTCTG 
TCCTGGACCT GGCCTCAGGG AGTGGGACCT GTCGCCTGGT GGGCGATTGA TACCCATCTT 
GATTTCCCAC GGGCCTGGCA GCACTCCCAG TCCGCCGATG CTGTCTTCGC AGCACAGAAA 
GATGGAGCCG AACACCTGCG TCAGAAGGGA CTGACTGAGG CCCGGTGGTT GCCCCTGGCA 
TGTGATCCCG AGATTCATGT GGCCACAGGA GAGGCTTGGG AATGGGACTG GGGATTTGTC 
GGCAATCTCT TTCCCGGGCC GAGGACTCAA TTGCTGGAAT GCCTGATCCG GCGTTTTCCA 
CAGGGATTTG CCGGGCGAGC TTACTTCCAC GAGATGGCCA GTATCTACAG TCGCTGCCGC 
ATCGCTTTTA ACTGCAGTCT CAAAAACGAC ATCAATATGC GGGTCTTTGA ATCGCTGGCA 
TGTGGCCCTC TTGTGGTGAC CAACGATCTC CAAGCGAATG GTCAGGAAGA ACTTTTTGTC 
ACCGGACAAC ACCTGATCAC CTACGAGTCA GCTGACGAAA TGATCGATCA GGTGACGTAC 
TACCTGAAAC ATGAAGACCA GCGTCTCCAG ATGGCTCGTG CTGGACGGGC ACTTGTGCTG 
GCCGAACACA CTTATGTCCA TCGTGCCAAA GTCCTCCTGC AAAGTCTGGA GAAACTGATG 
TCTCGCTCAG TCGTCCCGCA GCCTGAGACG TTCTCATCGA CACCTCGTAT CCAGGAAACA 
TCCTTTTCCA AAGGGACGGA GTATTTCGAA CATGCCAGGC CTGAAGTTCT GGCCCTGATC 
CCCCTGGATG CCAACACCAT TCTGGATGTG GGTTGTGGAA GTGGACGTTT AGGAGAATCA 
CTGAAACAAC GACAGATCTG CGCCGTCTGG GGCCTGGAAC GGGATCCACA GGCAGCCTCA 
TTGGCATGCC AGCGTCTGGA TCACCTGCTG AATGTCGACC TGGAACATTC GCAATTTGAG 
CTTCCCACAC AATTTTTCGA TGTCATCGTC GCTGCGGATG TTCTGGAGCA TCTCCGCGAT 
CCAGAACGTT TATTGCGAAA GTTGACAGGT GCACTTCGAC CGGGAGGACA CCTCATTCTC 
TCACTCCCCA ATCTTCAGAA CCATGTTGTC ATTCGCAACT TGCTTGATGG CCATTTCACC 
TATGAATCAG CAGGTCTCCT CGATGAGGAT CATGTTCGAT TCTTTACCCG GAATGAAATC 
GAAAAACTCC TGCTTCGTGC TGGCTTTGAT GTCGAAACAA CTCAAGCGGT TCCTGGACCA 
GGATGGGCCG AGTGGGAAAA GCAAGGCTCG AAGGGGGAGG TGCAGGTGGG AGGCCTGAGA 
ATCTCCGGGT TAACCCGCGA GCAGGCAGCT GACTTTTTCA CATATCAGTT TCTTTATAGA 
GCACGACTGC GCCATCGTAA TCCTGCATTA ACATCGGTCA TTCTCGTCAC CTGGAATCAA 
CTGGCCTATA CACGCCTCTG TCTCGACAGC CTGCGTTTAC GCACTTTTGA ACCTATTGAA 
ATCATTGTCG TCGATAACGC CTCAACAGAT GGGACTCTCG AATACCTGCG CTCACAACCC 
GAGATCCGCT TGATTGAAAA TGCAGAAAAT CGAGGGTTTC CAGCGGCAGT GAATCAGGGA 
ATGGCGATCG CTCGCGGCCA GCAACTCCTG CTGCTCAACA ACGACACAAT TGTCACGACT 
GGCTGGTTAA CGCGAATGCT GGAAGTTTTG AATACCGATC CCCAGGTCGG GCTGGTAGGG 
CCGGTCTCAA ATTGTGTGAG TGGCCCCCAG CAAGTCCCTG TTTCTTATGA CGATTTAAGT 
GCCATTGATG GGTTTGCCTG GAACTGGGGC AAGCAGCATC ATCAGGAGCG ATATTCACTG 
GAGCGACTGG TCGGATTTTG CCTGTTGATT CGCCGCGAGA CCTACGAGGC ACTGGGTGGT 
CTCGATGAGC GGTTCGGCAT CGGTAACTTC GAAGATGACG ACTACTGTGT GCGGGCCCGA 
ACCGCCGGAT ACAAAGTTAT TGTTGCTGTC GATAGTTTCG TTCATCACTT CGGTCACCGC 
AGCTTTCTGG CAAGCGATCT GGATTTCGGA GCCCTGCTGG AAGAAAACCG CGTGAAATTT 
GAGGAAAAGT GGGCTTCTCG CCTTAAGCCC CCCGCATCAC CATTTCATGC GACACAAGTG 
CCTGATGGTG GGCTTTTACT TCAACCAACC CAGCCAAAAC TCTCGCTCTG CATGATCGTG 
CGAGACAACG AGACGACAAT CGGCCCCTGC CTCGAAAGTA TTCGCCCCTG GGTCGATGAG 
ATGATCGTCA TCGACACCGG CTCGACCGAC GCCACACCAG TGATCTGCGA ATCAATGGGA 
GCGACAGTGC ATCACTGGGC CTGGAGGGAT GACTTCTCTG CCGCCCGCAA CGAATCCCTG 
CGCTATGCCA CGGGAGAATG GATCTTCTGG ATGGATTCGG ACGACACAAT CTCCGAAGAG 
TGCGGACGTC AGTTGCAGGC CCTCGTTCGC CAGACTGCTC CACCCCATCT ATTGGGCTAT 
GTGATGCAGG TCCATTGCCC CGGTCCGACT CAGGAAGGTG GCCGGAATGT CACGGTCGTC 
GACCATGTCA AAGTCTTCCG CAACAGACCC GATCTAAGGT TTGAACATCG TATTCACGAG 
CAGATTCTTC CGGCGATCCG CCGCGCGGGG GGAGACGTGG CCTTCACAGA CATCCATGTC 
ATTCATTCCG GCAGCGACCA TTCCGTAGAG GGCAAGGCTC GAAAACTGGA AAGGGATTTC 
CGGTTGCTGG AACTCGATCT GAAGGAACGA CCGGAACACC CCTTTGTATT GTTCAACTTG 
GGAATGACTT GCTGTGACTG TGGTCGCCAC CGAGAAGCCG TGGACTATCT GAATCGCTGC 
CTGGCGGTGT CAACTCCCGC AGAATCTCAC GTCCGCAAAG CTTATGCAAT ATTGCTTTCA 
AGCTTGTATG CACTCTCTCA GCATCACGAG GGGAACTCAA TTGCTCAAAG AGCACTGCAA 
TTGTTTCCTA ATGACAAGGA ATTGCTGTTT CGCGCAGCCA TGCTTGCCCA CATTCGTGGA 
GAGTTCGCTG AAGCAGAATC TCATTATCTG AAGATATTAA ACACTAAATG GGATATCGCT 
TTTTCAAGTG TGGATGCAGA TTTGTCAGGA TATAAGGCTC TCCACAACCT CGCAATAGTT 
TACATGGATA GCAATCACCC AGAGAAGGCA CTCAAAGCCT GGAATCAGAT TCTGTCACAA 
CACCCAGATT ATTTGCCTGC CCAAAGCGGG ATATCCGAAG TTATGAATAT TCTCAACGTG 
AACTGTTGA 

 

Protein sequence

MNLQRVAVVF DNRPRPETTG TYLLRAIQSL LPQTVHLLPD QLSTLSPKSF DGYVWVDDGL 
SWTWPQGVGP VAWWAIDTHL DFPRAWQHSQ SADAVFAAQK DGAEHLRQKG LTEARWLPLA 
CDPEIHVATG EAWEWDWGFV GNLFPGPRTQ LLECLIRRFP QGFAGRAYFH EMASIYSRCR 
IAFNCSLKND INMRVFESLA CGPLVVTNDL QANGQEELFV TGQHLITYES ADEMIDQVTY 
YLKHEDQRLQ MARAGRALVL AEHTYVHRAK VLLQSLEKLM SRSVVPQPET FSSTPRIQET 
SFSKGTEYFE HARPEVLALI PLDANTILDV GCGSGRLGES LKQRQICAVW GLERDPQAAS 
LACQRLDHLL NVDLEHSQFE LPTQFFDVIV AADVLEHLRD PERLLRKLTG ALRPGGHLIL 
SLPNLQNHVV IRNLLDGHFT YESAGLLDED HVRFFTRNEI EKLLLRAGFD VETTQAVPGP 
GWAEWEKQGS KGEVQVGGLR ISGLTREQAA DFFTYQFLYR ARLRHRNPAL TSVILVTWNQ 
LAYTRLCLDS LRLRTFEPIE IIVVDNASTD GTLEYLRSQP EIRLIENAEN RGFPAAVNQG 
MAIARGQQLL LLNNDTIVTT GWLTRMLEVL NTDPQVGLVG PVSNCVSGPQ QVPVSYDDLS 
AIDGFAWNWG KQHHQERYSL ERLVGFCLLI RRETYEALGG LDERFGIGNF EDDDYCVRAR 
TAGYKVIVAV DSFVHHFGHR SFLASDLDFG ALLEENRVKF EEKWASRLKP PASPFHATQV 
PDGGLLLQPT QPKLSLCMIV RDNETTIGPC LESIRPWVDE MIVIDTGSTD ATPVICESMG 
ATVHHWAWRD DFSAARNESL RYATGEWIFW MDSDDTISEE CGRQLQALVR QTAPPHLLGY 
VMQVHCPGPT QEGGRNVTVV DHVKVFRNRP DLRFEHRIHE QILPAIRRAG GDVAFTDIHV 
IHSGSDHSVE GKARKLERDF RLLELDLKER PEHPFVLFNL GMTCCDCGRH REAVDYLNRC 
LAVSTPAESH VRKAYAILLS SLYALSQHHE GNSIAQRALQ LFPNDKELLF RAAMLAHIRG 
EFAEAESHYL KILNTKWDIA FSSVDADLSG YKALHNLAIV YMDSNHPEKA LKAWNQILSQ 
HPDYLPAQSG ISEVMNILNV NC