| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2303 |
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| Symbol | |
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| ID | 5455609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2469991 |
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| End bp | 2470683 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877882 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001413574 |
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| Protein GI | 154252750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.432343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0684019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCGG ATATGTTCCG CGGCATGGCG TTTTCTTTTT CTCCCTCTCT TGTCATTTTC
GATTGCGACG GCGTGCTGGT CGATACCGAG ACGGTGTCGA ACCGGCTGCT TGTGCGCGTG
CTGGCGGAAG ATGGCTTCCA TGTCAGCTAT GAGGAATGCC GCCGGCTCTT TGTCGGCCGC
ACCATGCAGG CCGTGATGGA GCATGTGGAG GCGGCTATTG GCCGGTCATT GGGCGCGCAT
TGGCCCGCCT ATATCCGCGA GGAAACGCTG AAGGCCTTTG GCGAAGGTAT CGAGCCTGTC
GCGGGGGCGG AAGAAGCCCT GCTGGCGTTG CGCGCGAAGG GCATTCCCTT CTGCGTCGCC
TCGTCGGGCA AGTTCGAGAA GATGCGCTTC ACGCTTGGTG CAACGGGACT GCTGCCGCTG
GTGGAGGATG TTCTCTTCAG CGCGGAGCAG GTGGCGCGAG GCAAGCCCGC ACCGGATCTC
TTTCTCCATG CGGCGAAGGA AATGTGCCAT GCGCCGGAAG CCTGTCTCGT GATCGAGGAC
AGCGTGCCCG GCGTGCAGGC GGCGGTGGCG GCGGGCATGC CGGTCGTCGG CTATGCGGGC
GATCCACATA CGGATGCAGC GGGCCTGAAA AGCGAAGGCG CCCATGTCAT TCGCGACATG
AGCGCCTTGC TCGATCTGCT TGCCGGCAAT TAG
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| Protein sequence | MFADMFRGMA FSFSPSLVIF DCDGVLVDTE TVSNRLLVRV LAEDGFHVSY EECRRLFVGR
TMQAVMEHVE AAIGRSLGAH WPAYIREETL KAFGEGIEPV AGAEEALLAL RAKGIPFCVA
SSGKFEKMRF TLGATGLLPL VEDVLFSAEQ VARGKPAPDL FLHAAKEMCH APEACLVIED
SVPGVQAAVA AGMPVVGYAG DPHTDAAGLK SEGAHVIRDM SALLDLLAGN
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