| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1578 |
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| Symbol | |
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| ID | 5454441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1715940 |
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| End bp | 1716710 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877151 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_001412854 |
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| Protein GI | 154252030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.156565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGC TCCAGATCCA CCAGTTTCCC TGCCTGAGTG ACAATTACGG CTATCTTGTT
CACGAACCTT CATCGGGAAT GACTGCGGCC ATCGATACGC CGGAGGTGAA GCCGATCCTT
GATGCACTGG CGGAAAAGGG ATGGAAACTC ACCCATATCC TCAATACGCA CCATCATTTC
GACCATGCCG GCGGCAATGC GGAGCTGAAG GAGAAGACGG GCTGCACAAT CATCGGGCCG
AAGGGCGAAG AGGGAGCTAT CCCCGGCATC GACCGCGCTG TACAGGAAGG CGATATAGTT
GAGCTCGGCG CCGCCCGGGC CCGCGTTCTC GACGTGCCGG GGCACACGCG CGGCCACATC
GCCTACAGCT TCGACGACGA TCACATTGCC TTTGTCGGCG ACACATTGTT TGCGCTGGGC
TGCGGCCGCC TTTTCGAGGG GACGGCGCAG CAAATGTGGA CGTCGCTCGG CAAATTGATG
GCCCTGCCGG ACGACACGGT CGTCTATTGC GCCCATGAAT ATACGCAATC GAACGCCCGC
TTCGCACTCT CCGTCGAACC GCAGAACGAA GCGCTGATTG CCCGCGCGAA AGAAATCGAC
GCTAAGCGGG CGCGAGGCGA GTGGACCGTG CCGACGACCA TCGGTCTCGA GAAGGCGACC
AACCCCTTCC TGCGCGCCGC AAGCGCCGAT TTGCGCCGGA CAATCGGGCT TGAGACCGCC
GCTGACGTCG ATGTGTTCGC CGAAACCCGC AAACGGAAGG ACAATTTCTG A
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| Protein sequence | MTKLQIHQFP CLSDNYGYLV HEPSSGMTAA IDTPEVKPIL DALAEKGWKL THILNTHHHF
DHAGGNAELK EKTGCTIIGP KGEEGAIPGI DRAVQEGDIV ELGAARARVL DVPGHTRGHI
AYSFDDDHIA FVGDTLFALG CGRLFEGTAQ QMWTSLGKLM ALPDDTVVYC AHEYTQSNAR
FALSVEPQNE ALIARAKEID AKRARGEWTV PTTIGLEKAT NPFLRAASAD LRRTIGLETA
ADVDVFAETR KRKDNF
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