| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1572 |
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| Symbol | |
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| ID | 5454970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1710899 |
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| End bp | 1711519 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877145 |
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| Product | polyhydroxyalkonate synthesis repressor, PhaR |
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| Protein accession | YP_001412848 |
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| Protein GI | 154252024 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.291766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.567441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAAAAA AGACTTCATC CACGGACGAT GACGTCATCG TTATCAAGAA ATACGCGAAC
CGCCGTCTCT ACAACACAGC GACGTCGAGC TATGTGACGC TCGACCATCT GTGCGAAATG
GTGAAAAAGG GCCAGGAGTT CGTGGTTCGG GACGCCAAGA CGAGCGAGGA CATTACCCGC
TCCGTCCTCA CGCAGATCAT TTTCGAGGAA GAGGGCAAAG GCCAGAACCT GTTGCCGATC
AATTTCCTCA GGCAGCTGAT CCGCTTCTAT GGCGACAGCC TCCAGAGCTT TATCCCCTCC
TATCTCGAAA TGAGCATGAA CAGCTTCTCC AAGGAGCAGG AGAAGCTGCG CAATCGTGTG
ACGAATGTTC TTGGGGGGCG TGAGCGCCTG ACCCAGTTCG AGGATCAGAT CCGCCACAAT
CTCGAAATGT TCGACAACGC CATGCGCATG TTCACGCCCT TCGGGCGGGG CAGCGCCTCT
TCGCGCGAAG CGAAGGAAGA GGCCAAGGGC GCAAAGCCGA CGGAAACGCC GGCAGCCGAG
CCTCGCGATA GCGAACTGGA TGAACTTCGT CGCCAGATAG CGCAAATGCA GGCGCAGCTC
GAGGCCCTGT CGAAGAAATA G
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| Protein sequence | MAKKTSSTDD DVIVIKKYAN RRLYNTATSS YVTLDHLCEM VKKGQEFVVR DAKTSEDITR
SVLTQIIFEE EGKGQNLLPI NFLRQLIRFY GDSLQSFIPS YLEMSMNSFS KEQEKLRNRV
TNVLGGRERL TQFEDQIRHN LEMFDNAMRM FTPFGRGSAS SREAKEEAKG AKPTETPAAE
PRDSELDELR RQIAQMQAQL EALSKK
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