Gene Plav_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1388 
Symbol 
ID5456773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1519038 
End bp1519352 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content58% 
IMG OID640876961 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_001412665 
Protein GI154251841 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAA AACTGACCGG TAAAGCACGC GAAAAGGCGC TGGCGGGACT GAAGGGCTGG 
AGCAAGGTGA AGGGCCGCGA CGCCATCGAG AAGACATTCA AGTTCAAGGA TTTCAACGAG
GCCTTCGGCT TCATGACGCG CGTGGCGCTG GTGGCCGAAA AGATGGACCA TCATCCCGAG
TGGGCGAATG TCTATAACCG CCTCGATGTC GTGCTGACGA CGCATGACGC GGACGGGCTG
AGCGACAAGG ATGTGACACT CGCGACGCTG ATGGACAAAT GGGCGGGCAA GGCCGGGAAG
ACCACGAAGA AATAA
 
Protein sequence
MSGKLTGKAR EKALAGLKGW SKVKGRDAIE KTFKFKDFNE AFGFMTRVAL VAEKMDHHPE 
WANVYNRLDV VLTTHDADGL SDKDVTLATL MDKWAGKAGK TTKK