| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0771 |
|---|
| Symbol | |
|---|
| ID | 5454327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 835661 |
|---|
| End bp | 835948 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640876340 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001412051 |
|---|
| Protein GI | 154251227 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.959878 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACT TCGTCTACAT CCTTGCAAGC CGCAAACACG GAACGCTTTA TGTCGGCGTG
ACCAATGATA TTGCACGGCG GATCGATGAG CATCGAACCG GTGTCGCTTC CGGGTTCACG
AAGAAATATC GCATTCATCA GCTCGTCTAT GCAGAGACAC ATGACGATGT GAACGAAGCT
ATCGGACGGG AAAAGGCGAT CAAGGAATGG AAACGGGAGT GGAAGGTGCA GTTGATCGAG
AAGGCAAATC CCGAATGGGA CGATCTCACC GCATCATTGA ATCGATAA
|
|---|
| Protein sequence | MSYFVYILAS RKHGTLYVGV TNDIARRIDE HRTGVASGFT KKYRIHQLVY AETHDDVNEA
IGREKAIKEW KREWKVQLIE KANPEWDDLT ASLNR
|
|---|
| |