| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0193 |
|---|
| Symbol | |
|---|
| ID | 5455756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 218521 |
|---|
| End bp | 219324 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640875754 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001411473 |
|---|
| Protein GI | 154250649 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.572314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG CGACGGGAAA ACAGCTTCAG CATGGGGAAA CGCAGGCGGA AAACCGCGGC
GGACCTCATC TTGTCGCGGA TAATCCCGGT CTCTGGGTCG ATAAACTCGG CAAGAGCTTC
AAGGGCCGCC CGGTCGTTCG CGGCGTCAGC TTTCATGTCC AGCGCGGCGA GGCTGTCGGC
CTGCTCGGCC CCAATGGCGC GGGCAAGACC ACCGTCTTCT ACATGATTAC CGGCCTCATC
CAGCCCGATT ATGGAACCAT CTCGCTCGAT GGCGACGATG TCACCGGTCT GCCCATGTAT
CGCCGCGCCC GGCGCGGCAT CGGCTACCTG CCGCAGGAAG CGTCCATCTT TCGCGGCATG
ACGGTCGAAC AGAATATCCG CGCCGTGCTT GAAGTGATCG AACCGGACCG CGACCGCCGC
GAGGCCGAAC TCGACGACCT GCTCGCCGAA TTCTCGATCA CGCATCTCCG GCGCACGCCC
TCCATCGCGC TTTCGGGCGG CGAGCGGCGG CGCGTCGAAA TCGCCCGCGC CCTTGCCACG
CAACCTTCCT TCATGCTGCT CGACGAACCT TTCGCCGGCA TCGATCCGAT CGCGATCGGC
GACATCCGCG ATCTCGTGGC GCATCTGAAG GATCGCGGCA TCGGCGTTCT CATCACCGAT
CACAATGTTC GCGAGACATT GGAGCTCATC GACCACGCTG TCATCATCCA TGACGGCACC
GTGCTCATGG AAGGCGACCC TTCCGCCATC GTGGGAAACG AGGACGTGCG GCGGCTCTAT
CTCGGCGAAC GGTTCAGCCT CTAG
|
|---|
| Protein sequence | MASATGKQLQ HGETQAENRG GPHLVADNPG LWVDKLGKSF KGRPVVRGVS FHVQRGEAVG
LLGPNGAGKT TVFYMITGLI QPDYGTISLD GDDVTGLPMY RRARRGIGYL PQEASIFRGM
TVEQNIRAVL EVIEPDRDRR EAELDDLLAE FSITHLRRTP SIALSGGERR RVEIARALAT
QPSFMLLDEP FAGIDPIAIG DIRDLVAHLK DRGIGVLITD HNVRETLELI DHAVIIHDGT
VLMEGDPSAI VGNEDVRRLY LGERFSL
|
|---|
| |