Gene Plav_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0044 
Symbol 
ID5455529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp45950 
End bp47491 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content70% 
IMG OID640875603 
ProductAda metal-binding domain-containing protein 
Protein accessionYP_001411324 
Protein GI154250500 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGT CCGATTTTGG CGAGCGGTGC CGGCCGCGAC GACCTAGACT GCCTGCCATG 
AAACACGCAA TCGACATGGA CCCCGTTCCC TATCCGCTCG ACCCGGACGC CTGCTACCGC
GCCATCGAGG CGAAGGATGC ACGCTTCGAC GGGCGCTTTT TCGTCTGCGT CTCGACGACC
GGCATCTATT GCCGCCCGGT CTGTCCCGCC CGCGTGCCGA AGCGGCAGCA TTGCAGCTTC
GTGCCGAGCG CCGCGGCAGC GGAAGCGGCG GGGTTTCGCT CCTGCCTGCG CTGCCGCCCG
GAAGCGGCGC CCGGCACGCC CGCCTGGGCC GGGACGGCGG CGACGGTCTC GCGCGCGCTG
CGGCTGATCG AGGAAGGGGC GCTGGACGAG GGGCGGCTCG AAGATCTCGC CATGCGTCTC
GGCCTTGGCG AGCGGCAGTT GCGCCGGCTC TTCCTCGCGC ATGTCGGCGC GGGGCCGCAG
GCGGTGGCCG CGAACCGCCG GTTGCTGACC GCGAAGCAGC TCATCAGCGA TACGAACATG
CCTCTTGCCG AAGTCGCCTT TGCGGCCGGC TACCGGAGCC TTCGCCGCTT CAACGATGCG
ATCCTCACCG CTTATGGCGT GGCGCCGGGC GAAATCCGCC GCGCCTCGGA GAAGCAGGCG
GGGGGCAGCA TCCGCATTCG GCTCGGCTAT CGCCCGCCTT TCGATTTCGA CCGTATTCTC
GCCTATCTCT CGTCACGCGC GCTGCCGGGC GTCGAAAGGA TTTCGGAGGG CCGCTATGCA
AGGAGCTTCC ATCTCGGGGG CGTCAAAGGC CTTGTCACCG TTACGCCCGC CGCGACGGGA
AGCGCGCTCG ATGCGCGCAT TGCCGTTCTC GACGCGAAGG GCGGCACGGT GCCTGTGCGC
GCGATTGCCG CGCGGCTTCG CCGGTTGTTC GATCTCGATG CGGAGCCCGG CGCCATTGCC
GCCGCCTTTG CCGGCGATCC GGCAATCGGC CCCCGCTTCG CGCGCGTGCC GGGCTTGCGC
GTGGCCGGCG CCTTTGACGG CTTCGAGCTG GCGGTGCGGG CCGTGCTCGG CCAGCAGATT
TCGGTGAAGG GGGCGACCAC CATTGCAGGC CGCATCGTGG CGCGGCTTGG CGAGGAGGTG
ACGACGGAGG AGCCCGGCAT CACGCATTTC TTTCCCGCGC CGCGCGCGCT TGCCCGCGCC
GATCTATCCG GCCTCGGCCT GACGGGCGGA CGCATCGCGA CACTGACATC GCTCGCACAG
GCGGTTGCCT CCGGCGCGCT CGACTTCACG CCGCGCGAAA GCCTTGACGC GAAGCTCGCC
GAGCTGACGG CCTTGCCCGG CATCGGCGAG TGGACAGCGC ATTACGTGGC GCTGCGGGCG
CTGGGCGAAC CCGATGCCTT TCCGGCCTCC GACCTCGGTC TGCGCAAGGC AGTGGGCAAG
GGCGAGCCGG TTTCGACAAA GGAGCTGGAG CGGATGGCCG AAAGCTGGCG CCCCTGGCGC
GGCTATGCGG CGCTGGCGCT CTGGACGATT GATGGAGAGT GA
 
Protein sequence
MAMSDFGERC RPRRPRLPAM KHAIDMDPVP YPLDPDACYR AIEAKDARFD GRFFVCVSTT 
GIYCRPVCPA RVPKRQHCSF VPSAAAAEAA GFRSCLRCRP EAAPGTPAWA GTAATVSRAL
RLIEEGALDE GRLEDLAMRL GLGERQLRRL FLAHVGAGPQ AVAANRRLLT AKQLISDTNM
PLAEVAFAAG YRSLRRFNDA ILTAYGVAPG EIRRASEKQA GGSIRIRLGY RPPFDFDRIL
AYLSSRALPG VERISEGRYA RSFHLGGVKG LVTVTPAATG SALDARIAVL DAKGGTVPVR
AIAARLRRLF DLDAEPGAIA AAFAGDPAIG PRFARVPGLR VAGAFDGFEL AVRAVLGQQI
SVKGATTIAG RIVARLGEEV TTEEPGITHF FPAPRALARA DLSGLGLTGG RIATLTSLAQ
AVASGALDFT PRESLDAKLA ELTALPGIGE WTAHYVALRA LGEPDAFPAS DLGLRKAVGK
GEPVSTKELE RMAESWRPWR GYAALALWTI DGE