| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0007 |
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| Symbol | |
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| ID | 5455210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 6541 |
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| End bp | 8985 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875566 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001411287 |
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| Protein GI | 154250463 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000000000000127648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCC CCGCCGACGA TACACCCGAG GAATATGGTG CGGAATCGAT CAAGGTCCTG
AAGGGCCTCG ATGCCGTGCG CAAACGGCCG GGCATGTATA TCGGCGACAC CGATGACGGC
TCCGGCCTTC ATCACATGGT CTATGAAGTC GTCGATAATT CGATCGACGA GGCGCTGGCC
GGCTATTGCG ACGCGGTGAA CGTGCGTCTC AATGCCGACG GCTCCGTCAC CGTCATGGAT
AATGGCCGCG GCATTCCGGT GGAGATACAC AAGGGCGAAG GCGTCTCCGC CGCCGAAGTC
ATCATGACGC AGCTTCATGC CGGTGGTAAG TTCGACCAGA ATTCCTACAA GGTCTCGGGC
GGCCTCCACG GCGTCGGCGT GTCGGTGGTG AACGCGCTTT CCGACTGGCT CGAAATGCGC
ATCTGGCGCG CCGGCAAGGA ACACCGCATC CGCTTCCAGC ATGGCGTGCC CGACGCCCCG
CTCGAAGCCA CCGGCCCCGC TCCCATCGGC GCCGACGGCA AGCCCGTCAC CGGCACCGAG
ATCACCTTTC ATCCGTCGAG CGAAACCTTC ACGCAGACCG AGTTCGATTT CGCAACACTC
GAACACCGGC TGCGCGAACT CGCCTTCCTC AATTCCGGCG TGAAGATCAA CCTCACCGAC
CATCGCGGCG TCGAGCCGAA AGAAGTGAAG CTGATGTATG AGGGCGGCCT CGAAGCCTTC
GTCCGCTTCC TTGATCGCAC CAAGGCGCCG CTCATCCAGA AGCCCATCGC CATCCGCGCC
GAGCGCGAAG GCATCACCGT CGAAGTCGCC ATGTGGTGGA ACGACAGCTA CCACGAGAAC
GTGCTCTGCT TCACCAACAA CATCCCGCAG CGCGATGGCG GCACGCATCT CGCGGGCTTC
CGTGGCGCGC TCACTCGCGT CATCAACAGT TACGCGAATG AAAGCGGCAT CGCGAAGAAG
GAGAAGGTAA GCCTCACCGG CGACGACGCC CGCGAAGGCC TCACTTGCGT CCTCTCGGTC
AAGGTGCCCG ATCCGAAATT CTCCTCGCAG ACGAAAGACA AGCTCGTCTC GTCGGAAGTC
CGCCCTGTCG TCGAAGGCCT CGTCAACGAT GCGCTCTCCA CCTGGCTCGA GGAACATCCC
GCCGAAGCCC GCCAGGTCGT GACCAAGGTC GTGGAAGCCG CCGCCGCGCG CGAAGCCGCC
CGCAAGGCGC GCGAGCTGAC GCGCCGCAAG GGCGCGCTCG ATGTCTCGAG CCTCCCCGGC
AAGCTCGCCG ATTGTCAGGA ACGCGATCCC GCGAAATCCG AACTCTTCAT CGTCGAGGGT
GACTCGGCCG GCGGCTCCGC GAAACAGGCG CGCGATCGCT CCAACCAGGC CGTGCTTCCC
CTTCGCGGCA AGATTCTGAA CGTCGAGCGC GCGCGCTTCG ACAAGATGCT CTCCTCGAAT
GAAATCGGCA CGCTCATCAC CGCGCTCGGC GCGGGCATCG GCCGCGACGA TTTCAATATC
GACAAGCTCC GCTACCACAA GATCATCATC ATGACCGACG CCGACGTCGA CGGCGCTCAT
ATCCGTACGC TCCTTCTCAC CTTCTTCTAT CGCCAGATGC CGGAGGTGAT CGAGCGCGGC
CACCTCTATA TCGCGCAGCC GCCGCTCTAC AAGGTGCGTC GCGGCACCTC GGAGACCTAT
CTGAAAAACG AAAAGGCGCT CGGCGATTAT CTGATCTCGA CCGGCCTCGA AGACATGGTG
CTGACGCTGC ATGACGGTTC GCAGCGCGCC GGTCCCGATT TGAGCGACAT CGTCGCCAGG
GCGCGCTCGG TCCGTGCCGT GCTGGAAGGT CTGCCGACCA AATATCCGCA TTTCGTCGTC
GAACAGGCGG CGATTGCCGG CGCGCTCAAT CCGAAGGCGC TCGCCGAACC CGAACATGCA
AGGGAAGCCG CCGCCTATAT CGCGCGGCGT CTCGATCTTC TGTCGGAAGA AACCGAGCGC
GGCTGGACCG GCGAGACGAC GCAGGATGGC GGTCTCCGCT TCGCCCGCGA GGTGCGTGGC
GTCCGCGAGG AAGTCTCGAT CGACGGCCCC CTCATCGCCA GCGCCGATGC CCGCCGTCTC
GACAGCTATA CGGAGCATCT GCAGGAGGTC TATGTGAAGG CCGCCACGCT CCGCCGCAAG
GACGACAGCC ACATCATCCG CTCGCCCTCC CAGCTTCTCG ACGCGGTCAT GGCCGCCGGC
ACCAAAGGGA ACACGGTGCA GCGCTACAAG GGCCTCGGCG AAATGAACCC CGGCCAGCTC
TGGGAAACGA CGCTCGACCG CGACGCCCGC TCGCTCCTGC AGGTGAAGAT CCGCGAGCTG
GACGATGCCG ACGACCTCTT CGTGAAGCTC ATGGGCGATG TCGTGGAACC CCGCCGCGAT
TTCATCCGCG AAAACGCGCT GAACGTCGCC AATCTGGATA TCTGA
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| Protein sequence | MTTPADDTPE EYGAESIKVL KGLDAVRKRP GMYIGDTDDG SGLHHMVYEV VDNSIDEALA
GYCDAVNVRL NADGSVTVMD NGRGIPVEIH KGEGVSAAEV IMTQLHAGGK FDQNSYKVSG
GLHGVGVSVV NALSDWLEMR IWRAGKEHRI RFQHGVPDAP LEATGPAPIG ADGKPVTGTE
ITFHPSSETF TQTEFDFATL EHRLRELAFL NSGVKINLTD HRGVEPKEVK LMYEGGLEAF
VRFLDRTKAP LIQKPIAIRA EREGITVEVA MWWNDSYHEN VLCFTNNIPQ RDGGTHLAGF
RGALTRVINS YANESGIAKK EKVSLTGDDA REGLTCVLSV KVPDPKFSSQ TKDKLVSSEV
RPVVEGLVND ALSTWLEEHP AEARQVVTKV VEAAAAREAA RKARELTRRK GALDVSSLPG
KLADCQERDP AKSELFIVEG DSAGGSAKQA RDRSNQAVLP LRGKILNVER ARFDKMLSSN
EIGTLITALG AGIGRDDFNI DKLRYHKIII MTDADVDGAH IRTLLLTFFY RQMPEVIERG
HLYIAQPPLY KVRRGTSETY LKNEKALGDY LISTGLEDMV LTLHDGSQRA GPDLSDIVAR
ARSVRAVLEG LPTKYPHFVV EQAAIAGALN PKALAEPEHA REAAAYIARR LDLLSEETER
GWTGETTQDG GLRFAREVRG VREEVSIDGP LIASADARRL DSYTEHLQEV YVKAATLRRK
DDSHIIRSPS QLLDAVMAAG TKGNTVQRYK GLGEMNPGQL WETTLDRDAR SLLQVKIREL
DDADDLFVKL MGDVVEPRRD FIRENALNVA NLDI
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