Gene Ping_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3506 
Symbol 
ID4625506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp4334477 
End bp4334653 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content42% 
IMG OID639798622 
Productribosomal protein L30 
Protein accessionYP_944788 
Protein GI119947108 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000460865 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000075211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACTA TTAAAGTAAC TCAAGTTAAA AGTGCAATTG GCCGTTTACC AAAGCACCGT 
GCAACAATCA CAGGTTTAGG CCTGCGTCGC ATCAATCATA CTGTCGAGCT GGAAGATACT
CCAGCAGTAC GTGGTATGGT TAATAAAGTT CATTATATGG TTAAGGTTGA GGGGTAA
 
Protein sequence
MATIKVTQVK SAIGRLPKHR ATITGLGLRR INHTVELEDT PAVRGMVNKV HYMVKVEG