Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1135 |
Symbol | |
ID | 4625055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1422924 |
End bp | 1424810 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796350 |
Product | transcriptional regulator, Fis family protein |
Protein accession | YP_942571 |
Protein GI | 119944891 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0373953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.889933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTAAAA AACGCATTCC CATAAGGAAT CATTCCGCAG AATCCGCACT CTTTATGCGC CGTACTCTGG TAATTTTTAT TGCGATAGTC ATTGCAATAG GGGTATTAAT TAGCAACCTC TATTACCTGC AAATAACCTC CTTTGAAAAA TATCAAACAC GTTCAAATGA CAACCGTATA AGTGTACAAA CGATCTCGCC AAACAGAGGC CTTATTTATG ATCGTAATGG CATCATTATT GCCGAGAACC GGCCAGTTTA TAATCTGCAG GTGATCGTTA ATAAGACAGA AAATTTAGAT GAAAATATCC TTGAATTACA AAAATTATTA GCGTTAACGG ATCAAGAAAT CAAAAATTTT AACGAACAAA ACCGTTATGC AAGATCCTTC AAAGCTATCA TCATTCGCCA ACAATTAAGC GAAAAAGAGG TCGCTCTTTT TAGCGTTAAT CAACATAGAT TTAAAGGCTT TTCGATTCAA GCGAATCTTA AACGTTTTTA TCCTTTTGCT GATACCTTCA CGCATGCTTT GGGTTATATC GCCAAAATTA ATAGCGCTGA CCTGCGACGA ATTGAAAAGC GGGGCGAAAG CGCACGTTAT CGGGCAACGG AATATATCGG TAAACTGGGC ATCGAAAAAT ATTATGAAGA TTTATTACAT GGGGAGCCTG GCCAACGTCA AGTTGAAGTA GACAGTTGGG GAAAAGTAAT ACGTACTCTG AGCTTTACCC CGCCTATCCC GGGAAAAGAC ATTATATTAA ACCTTGATGT CAAACTGCAA TTAAAAGCAC AACAATTATT GGGTGAAAAT CGCGGTAGCG TGGTTATACT GGATGCGAAC ACAGGTGGCG TTTTAAGTTT AGTCTCCAGT CCAAGTTATG ATCCTAACCT TTTTGTGCAA GGCATAAGTC AGCGGGAATA TCAGGCACTC CTGCAATCAA AAGACCGTCC GCTGATTAAC CGGGCCACTC AGGGACGCTA TCCGCCAGCC TCAACCATTA AACCACAAAT GGCTTTGCTC GCGTTAGATG CCAGTGTTAT AACCGAACAA ACAGAAATAT TCGATCCTGG TTGGTGGATT GTCCCCAATT CTAAACGCCG CTTTCGTGAT TGGAAGCAAT GGGGCCATGG TACAGTTGAT GTTCACAAGG CCATAGAACA AAGCTGTGAT ACCTTTTTTT ATCAAACCGC CTATAAAACG GGTATTGACC GCATGAGTCC TTTTATGAAA AAGTTTGGTT TTGGCAATTA TAGTGGTCTT GATATAGGGG AAGAAACAAA AGCAATCATG CCTTCTCGTG AATGGAAAAA AGCAAGATTT AACGAGCAAT GGTACGACGG TGATACAATA TCGGTGGGTA TCGGGCAAGG TTACTGGACG GTTACACCGA TTCAACTAAC CAAAGCCACG GCAATCTTAG CCCGGAAAGG TAAGGTAATA GAGCCACATA TGCTGCAGTC CATTATTTCA GGGGAGAGTA CTTTTACCCC CACACGCGAA GCGCAAAAAC CGATCCAGCT AAAGGATGAT CATTACTGGG AAGTCGCCTT AGATGCTATG TATGCCGTTA CTAATAAAAA AGCCGGTACT GCTGATAAAG CATTTGTCGG CACCTCCTAT TCCGTAGCCG GTAAATCGGG TACGGCACAG GTTGTTAATA TCAAAGAAAA TGAATCCTAT GATGCCGATA GCATGAAAGA GCGTCATCGG GATAATGCAA TGTTTGTAGC ATTTGCGCCC TTTAAAGAGC CTGAAATTGT CGCCAGTGTT GTTCTGGAGA ATGCCGGGGG TGGTAGCAGT CACGCAGCCC CGATTGTCCG TTCTTTGTTT GATGAATATT TTAAAAATAC GTCACCCTCT CCTGCTACTC AATCGTTAGG CTTATAA
|
Protein sequence | MVKKRIPIRN HSAESALFMR RTLVIFIAIV IAIGVLISNL YYLQITSFEK YQTRSNDNRI SVQTISPNRG LIYDRNGIII AENRPVYNLQ VIVNKTENLD ENILELQKLL ALTDQEIKNF NEQNRYARSF KAIIIRQQLS EKEVALFSVN QHRFKGFSIQ ANLKRFYPFA DTFTHALGYI AKINSADLRR IEKRGESARY RATEYIGKLG IEKYYEDLLH GEPGQRQVEV DSWGKVIRTL SFTPPIPGKD IILNLDVKLQ LKAQQLLGEN RGSVVILDAN TGGVLSLVSS PSYDPNLFVQ GISQREYQAL LQSKDRPLIN RATQGRYPPA STIKPQMALL ALDASVITEQ TEIFDPGWWI VPNSKRRFRD WKQWGHGTVD VHKAIEQSCD TFFYQTAYKT GIDRMSPFMK KFGFGNYSGL DIGEETKAIM PSREWKKARF NEQWYDGDTI SVGIGQGYWT VTPIQLTKAT AILARKGKVI EPHMLQSIIS GESTFTPTRE AQKPIQLKDD HYWEVALDAM YAVTNKKAGT ADKAFVGTSY SVAGKSGTAQ VVNIKENESY DADSMKERHR DNAMFVAFAP FKEPEIVASV VLENAGGGSS HAAPIVRSLF DEYFKNTSPS PATQSLGL
|
| |