Gene Ping_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1135 
Symbol 
ID4625055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1422924 
End bp1424810 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content42% 
IMG OID639796350 
Producttranscriptional regulator, Fis family protein 
Protein accessionYP_942571 
Protein GI119944891 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0373953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.889933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTAAAA AACGCATTCC CATAAGGAAT CATTCCGCAG AATCCGCACT CTTTATGCGC 
CGTACTCTGG TAATTTTTAT TGCGATAGTC ATTGCAATAG GGGTATTAAT TAGCAACCTC
TATTACCTGC AAATAACCTC CTTTGAAAAA TATCAAACAC GTTCAAATGA CAACCGTATA
AGTGTACAAA CGATCTCGCC AAACAGAGGC CTTATTTATG ATCGTAATGG CATCATTATT
GCCGAGAACC GGCCAGTTTA TAATCTGCAG GTGATCGTTA ATAAGACAGA AAATTTAGAT
GAAAATATCC TTGAATTACA AAAATTATTA GCGTTAACGG ATCAAGAAAT CAAAAATTTT
AACGAACAAA ACCGTTATGC AAGATCCTTC AAAGCTATCA TCATTCGCCA ACAATTAAGC
GAAAAAGAGG TCGCTCTTTT TAGCGTTAAT CAACATAGAT TTAAAGGCTT TTCGATTCAA
GCGAATCTTA AACGTTTTTA TCCTTTTGCT GATACCTTCA CGCATGCTTT GGGTTATATC
GCCAAAATTA ATAGCGCTGA CCTGCGACGA ATTGAAAAGC GGGGCGAAAG CGCACGTTAT
CGGGCAACGG AATATATCGG TAAACTGGGC ATCGAAAAAT ATTATGAAGA TTTATTACAT
GGGGAGCCTG GCCAACGTCA AGTTGAAGTA GACAGTTGGG GAAAAGTAAT ACGTACTCTG
AGCTTTACCC CGCCTATCCC GGGAAAAGAC ATTATATTAA ACCTTGATGT CAAACTGCAA
TTAAAAGCAC AACAATTATT GGGTGAAAAT CGCGGTAGCG TGGTTATACT GGATGCGAAC
ACAGGTGGCG TTTTAAGTTT AGTCTCCAGT CCAAGTTATG ATCCTAACCT TTTTGTGCAA
GGCATAAGTC AGCGGGAATA TCAGGCACTC CTGCAATCAA AAGACCGTCC GCTGATTAAC
CGGGCCACTC AGGGACGCTA TCCGCCAGCC TCAACCATTA AACCACAAAT GGCTTTGCTC
GCGTTAGATG CCAGTGTTAT AACCGAACAA ACAGAAATAT TCGATCCTGG TTGGTGGATT
GTCCCCAATT CTAAACGCCG CTTTCGTGAT TGGAAGCAAT GGGGCCATGG TACAGTTGAT
GTTCACAAGG CCATAGAACA AAGCTGTGAT ACCTTTTTTT ATCAAACCGC CTATAAAACG
GGTATTGACC GCATGAGTCC TTTTATGAAA AAGTTTGGTT TTGGCAATTA TAGTGGTCTT
GATATAGGGG AAGAAACAAA AGCAATCATG CCTTCTCGTG AATGGAAAAA AGCAAGATTT
AACGAGCAAT GGTACGACGG TGATACAATA TCGGTGGGTA TCGGGCAAGG TTACTGGACG
GTTACACCGA TTCAACTAAC CAAAGCCACG GCAATCTTAG CCCGGAAAGG TAAGGTAATA
GAGCCACATA TGCTGCAGTC CATTATTTCA GGGGAGAGTA CTTTTACCCC CACACGCGAA
GCGCAAAAAC CGATCCAGCT AAAGGATGAT CATTACTGGG AAGTCGCCTT AGATGCTATG
TATGCCGTTA CTAATAAAAA AGCCGGTACT GCTGATAAAG CATTTGTCGG CACCTCCTAT
TCCGTAGCCG GTAAATCGGG TACGGCACAG GTTGTTAATA TCAAAGAAAA TGAATCCTAT
GATGCCGATA GCATGAAAGA GCGTCATCGG GATAATGCAA TGTTTGTAGC ATTTGCGCCC
TTTAAAGAGC CTGAAATTGT CGCCAGTGTT GTTCTGGAGA ATGCCGGGGG TGGTAGCAGT
CACGCAGCCC CGATTGTCCG TTCTTTGTTT GATGAATATT TTAAAAATAC GTCACCCTCT
CCTGCTACTC AATCGTTAGG CTTATAA
 
Protein sequence
MVKKRIPIRN HSAESALFMR RTLVIFIAIV IAIGVLISNL YYLQITSFEK YQTRSNDNRI 
SVQTISPNRG LIYDRNGIII AENRPVYNLQ VIVNKTENLD ENILELQKLL ALTDQEIKNF
NEQNRYARSF KAIIIRQQLS EKEVALFSVN QHRFKGFSIQ ANLKRFYPFA DTFTHALGYI
AKINSADLRR IEKRGESARY RATEYIGKLG IEKYYEDLLH GEPGQRQVEV DSWGKVIRTL
SFTPPIPGKD IILNLDVKLQ LKAQQLLGEN RGSVVILDAN TGGVLSLVSS PSYDPNLFVQ
GISQREYQAL LQSKDRPLIN RATQGRYPPA STIKPQMALL ALDASVITEQ TEIFDPGWWI
VPNSKRRFRD WKQWGHGTVD VHKAIEQSCD TFFYQTAYKT GIDRMSPFMK KFGFGNYSGL
DIGEETKAIM PSREWKKARF NEQWYDGDTI SVGIGQGYWT VTPIQLTKAT AILARKGKVI
EPHMLQSIIS GESTFTPTRE AQKPIQLKDD HYWEVALDAM YAVTNKKAGT ADKAFVGTSY
SVAGKSGTAQ VVNIKENESY DADSMKERHR DNAMFVAFAP FKEPEIVASV VLENAGGGSS
HAAPIVRSLF DEYFKNTSPS PATQSLGL