Gene Phep_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3210 
Symbol 
ID8254329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3819265 
End bp3820182 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID644936863 
ProductPpx/GppA phosphatase 
Protein accessionYP_003093467 
Protein GI255533095 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.307679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.479599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAG CTGTAATTGA CCTGGGTACC AATACTTTCC ATCTTGTTAT TGCTAAAATT 
ACAGCTGATG GAATCCAGGT CATTTATAAA ACCAACCTGC CGGTAAAGCT GGGTGAAGGC
AGGATCAACG ATAACATCAT CATTCCTGAA GCTTATGCGC GTGGACTACA GGCACTGCAA
GGCTTTAACC GGGAGATAGA AAAATATCAG GTGGATGTGG TAAAAGCCAT CGCTACTTCA
GCCATCCGTA GCGCGGCCAA TGGCAGCAAC TTTGTCAATT CCGCTAAATC TGATGCCGGA
ATTGACATTG AAGTGATTAC AGGTGATAAA GAAGCAGAAT ATATTTTTAA AGGTGTAAAA
GCAACAGGGG CAATTAAGGG CACCTGCCTG ATTATGGATA TAGGTGGTGG AAGCACTGAA
TTCATTATTT GCAACCCGGA TGGATTACAC TGGAAAAAAA GTTATGACAT TGGCGCAGCA
CGGTTAATGC AGGCCTACTT TCATTCAGAT CCGATCAGCG ATAAAGATCA ATCGGCTATC
CGGGATCATT TAGATAAAGA ACTGGGTACT TTAAAAACAG CCTGTAACAC TTACCGGCCA
ACGCAGCTGA TCGGATCTGC AGGGGCATTC GAAACCTTTG CAGGAATGCT GGATCAGCAA
CTGGACTTAA ACAAAATCAG CACTGCAGAC ATTGACCTGC AGAACTACCA TACCCTTTCT
AAAAACCTGA TTGCTTCCAC ACATGCAGAA AGGGAGCAAA TGCCCGACCT GATTAGCTTA
AGGGTAGACA TGATTGTCAT TGCTGCCATT ATAACAGATT ATGTGCTGGA GGCCAGTGGC
ATCAACAGCA TCAGCCTGTC TACTTATGAT TTAAAAATGG GTGTACTGCA GGCAATTAGC
GAGTCAGAAA CCAGCTAA
 
Protein sequence
MIAAVIDLGT NTFHLVIAKI TADGIQVIYK TNLPVKLGEG RINDNIIIPE AYARGLQALQ 
GFNREIEKYQ VDVVKAIATS AIRSAANGSN FVNSAKSDAG IDIEVITGDK EAEYIFKGVK
ATGAIKGTCL IMDIGGGSTE FIICNPDGLH WKKSYDIGAA RLMQAYFHSD PISDKDQSAI
RDHLDKELGT LKTACNTYRP TQLIGSAGAF ETFAGMLDQQ LDLNKISTAD IDLQNYHTLS
KNLIASTHAE REQMPDLISL RVDMIVIAAI ITDYVLEASG INSISLSTYD LKMGVLQAIS
ESETS