| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3037 |
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| Symbol | |
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| ID | 8254149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3628346 |
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| End bp | 3629560 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936686 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003093297 |
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| Protein GI | 255532925 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0138624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTAA CGGATATAAG ACAGCAGTTC CCCATATTAT CGAGGATGGT GAAAGGTAAA
CCACTGGTTT ATTTCGACAA TGCTGCTACC TCGCAAAAGC CGCAACAGGT AATTGATGCA
TTGACGCATT ATTATTCGTT TTACAATGCC AATATACACC GCGGCATACA TACGCTTGCT
GAAGAGGCGA CAATGGCTTA TGAAGCTACC CGTGAGGCTG TTAGGGATTT TGTTGGTGCA
GATGCTACTG AAGAGATCAT TTTTACCAAA GGAACAACAG AGGCCATAAA CCTGGTTGCT
TATACCTGGG GCAGACAAAA CATTACTGCA GGGGACGAGA TCATTATATC CGGCATGGAA
CATCATTCGA ATATTGTTCC CTGGCAAATA CTATGTGAAG AGAAAAAGGC TTTCCTGAAA
GTAATTCCTG TTACAGATGA GGGAGAACTT TCCATAGAAG CTTATAAAGA ATTACTGGGC
TCGAAAACAA AACTGGTAGC TGTTGTTCAT GTATCTAATT CGTTGGGTAC CATAAATCAT
GTGAACGAAA TTATCACTGC TGCACATCTT GTTGGTGCCA AAGTGCTGAT AGATGGGGCC
CAATCTGCAG TCCACCTGGA TATCGATGTT CAGAAAATGG ATTGTGATTT TTTTGCTTTT
TCCGGCCATA AGGTATATGG CCCTACAGGG GTTGGTGTAC TGTATGGTAA ACGCGAATTG
TTGGAGGATA TGCCTGTTTT TCAAGGTGGT GGGGAAATGA TCAAAGATGT TACATTTGAG
CAGACTACTT ATAATGACCT GCCTTATAAA TATGAAGCGG GTACACCAAA TATTGCAGAT
ACAATTGCTT TAAAAACAGC ATTGGATTTT ATTACTGCAG TTGGAAAAGA TAAGATCAGG
GTACATGAAG CTAATTTACT GGCCTACGCA ACAGCTCATT TAAAAACCAT TCCGGATTTG
AGCATCATTG GCGAAGCCAA AGACAAAGCG GGTCTGGTGT CTTTTGTTGT TAAAGGTATA
CATCCACAGG ATATTGGGGT ATTGCTCGAT AATATGGGTA TAGCTGTTAG AACAGGACAT
CATTGTACGC AACCATTGAT GAAACGCTTT GGTATCCCTG GTACGGTAAG GGCATCCTTT
GCAATGTATA ACCAACCGGA AGAAATAGAT GTGCTGATTA CCGGACTGCA CAAAACTATA
AAAATGCTAA CGTAA
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| Protein sequence | MVLTDIRQQF PILSRMVKGK PLVYFDNAAT SQKPQQVIDA LTHYYSFYNA NIHRGIHTLA
EEATMAYEAT REAVRDFVGA DATEEIIFTK GTTEAINLVA YTWGRQNITA GDEIIISGME
HHSNIVPWQI LCEEKKAFLK VIPVTDEGEL SIEAYKELLG SKTKLVAVVH VSNSLGTINH
VNEIITAAHL VGAKVLIDGA QSAVHLDIDV QKMDCDFFAF SGHKVYGPTG VGVLYGKREL
LEDMPVFQGG GEMIKDVTFE QTTYNDLPYK YEAGTPNIAD TIALKTALDF ITAVGKDKIR
VHEANLLAYA TAHLKTIPDL SIIGEAKDKA GLVSFVVKGI HPQDIGVLLD NMGIAVRTGH
HCTQPLMKRF GIPGTVRASF AMYNQPEEID VLITGLHKTI KMLT
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