| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2782 |
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| Symbol | |
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| ID | 8253890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3286426 |
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| End bp | 3289188 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936428 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003093043 |
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| Protein GI | 255532671 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.396863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTA AACCGATCCT TTCCGTACTG CTGCTATTGT TGTTTTCTGT TGTTCAGGCC
CAGCAAACCG AACAACTGTA TTTGTCGGGT ACCGGCAACG ACGATACAGT TAAATGGGAT
TTTTTCTGTA CTGCAGGTAT GAATTCGGGT AAATGGACAA CTATACCGGT TCCTTCCAAC
TGGGAATTAC AGGGCTTTGG AAAATACAAT TACGGATTTG CCAAAGACAG TATAAGGGGC
AAGGAAGAGG GCTTATATAA ATATAATTTT AAGGTGCCAT CAGCCTGGAA GGGTAAAAAG
ATCAATATTG TATTTGAAGG ATCAATGACC GATACGGAAG TAAAGGTTAA TAGAAAATCG
GCAGGCCCCA CACATCAGGG ATCTTTTTAC GTATTCCGGT ACGATGTATC AAGCCTGTTA
AAATATGGTT CAGCCAACCT CCTTGAGGTA AAAGTAGCCA AACATTCTGC CAATAAATCG
GTAAACGATG CCGAGCGGAA AGCAGATTTC TGGATTTTTG GAGGCATATT CAGGCCAGTA
TATCTGGAAG CACTTCCTCT GCAGCATATA GAGAGGGTAG CTGTAGATGC GCAGGCCGAT
GGTCGGTTTA AAGCTGAAGT TCAGGTAGTG GGCAAGGCAG ATGAGCTTAG CCTGCAGTTG
TATACAGCCG ATGGAAAGCA ATACGGTGCG CCAGTCAGCA CCAGGTTAAA TAGTAAAGCC
GGAATGACCA GCCTTTCAGG TATTTTTCAG TCGCCGCAAT TGTGGTCTTC AGAATTTCCT
AATCTGTACA CCGCCACATT CACCCTATAT CAAAATAGCA AAATTATACA TACCCTGTCC
AAAAAGATAG GTTTCCGTAC CATTCTTGTA AAACCAAGGG ATGGGGTATA TGTAAATGGT
GTTAAAATAA AATTTAAAGG TGTGAACAGG CATTCTTTCC GGCCTGCATC CGGAAGAACA
TTGAGCAAAA AGAACAGCGT TGAGGACGTT GAGTTAATGA AGGAAATGAA TATGAATGCG
GTGCGCATGT CGCATTACCC TCCTGATGGC CATTTTCTGG ATGTATGTGA TTCGCTGGGC
CTGTATGTAA TGGATGAACT TGCTGGTTGG CACGGACATT ACGATACCCC AACAGGAACC
AAACTGGTTA AAGAAATGCT GCGCCATGAT GTGAACCATC CATCCATTAT TTTCTGGGCC
AATGGAAATG AGGGAGGGCA TAACCGCGAT CTGGATCCGC TGTTTGCCAA AGAAGATATT
CAAAAACGTC CGGTAATCCA CCCCTGGGAA GATTTCAATG GATTCGATAC CCAGCATTAT
CGGGAATACA ACTATGGTAT TGGCAACTAC AGGCAGGGCC ACAGCATACA GATGCCCACT
GAATTTTTAC ATGGTATGTT TGACGGGGGA CATGGTGCCA ATTTGGAAGA TTACTGGAAC
GATATGTTAT CGAACCCGCT TTCTGCCGGT GGATTTCTCT GGGATTTTGC TGATCAGGGG
GTTGTGCGTA CCGACAAGAA TAACACAATA GATGCAGATG GCAACCGCGG GGCTGATGGA
ATTGTAGGAC CTTTCCATGA AAAAGAGGGC AGCTATTTTG CCATCAAAGA GATCTGGAGC
CCTGTGTTTT TTGAACATAG GGAAATGACA CCCGAATTTG ACGGGGTATT TAACATTGAG
AACCGCTATC ATTTTGCGAA TCTGAATACC TGTACGTTTA GCTGGAAACT GTTAAACCTG
AAAACCGGAC AGGAAATGAG CGGGAGGTTA ATCTCACCTG ACGTACAACC GGCAGCAAAA
GGCCGGCTGC AGGTAAATCT GCCACAAAAC TGGTTTTCTT TCGACGTATT GTACCTTACC
GCTACCGATC TATATGGCAA AGAATTGTTT ACCTGGAGCT TTCCCATCAC ACTCCCTAAA
AAAGAGGCGT TAACCCTGGT TAAAACTGCT GGAGACAAGG CGGTAAGCTT TAAAGAAAGT
GATAGCCTTT ATACCGTTTC AGCAAATGGT ATACAGTTAA GCTTCAGCAA AAAAAATGGG
ATATTGCGTC AGGTAAGGAA TGAAAAGGGA ATTATCCCAT TTACAAATGG ACCGCTTGTA
CAGGAAGGTG CCACCAATTT TCAAAATATC CGTCAGTATA AGGATGGTGA GAACCTGGTC
ATAGCATCCA CTTTTGACAG AAAAACTGCC TACAATACCT TAAAATGGAC AATCTATCCT
TCGGGCTGGG TAAAACTACA GGTGAAATAT TTCCCTGCCG AGTACCTTAC TAATTTTATC
GGATTAAATT TTTCTTTTCC GGAAGACCAG ATCAAGGGCG TGGAATACAT GGGAAGAGGC
CCATACAGGG TATGGAAAAA CCGCTTAAAG GGCAATCCTT TTGGTGTCTG GAAAAAGGAT
TATAACAATA CAGAAACCGG CGAAACCTGG ATATACCCCG AATTCAAAGG ATATCATTCT
AACATGTACT GGTGTAAATT TATTACAAAA GAGCAACCTT TTAAGGTGGT AACCGAAAAT
GAGGACGTTT TTTTAAGGTT GTTTAGCGCA GCATTTAAAA CCGACCAATG GCACAATTAT
GAACCGCTTT TCCCGTCTGG CGACATTTCC TTTATGCAGG GCATTCCCGG TATCGGTACA
AAAACGCAAA GGGCAGACCG GAGTGGGCCA ATGGCCATGA AAAACATTTT TTATGATTAT
GAAAAAGATC CGGCAAGAGC ATTGGACTTA ACACTTTACT TTGATTTCTC GGTGAACAAC
TAA
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| Protein sequence | MKLKPILSVL LLLLFSVVQA QQTEQLYLSG TGNDDTVKWD FFCTAGMNSG KWTTIPVPSN
WELQGFGKYN YGFAKDSIRG KEEGLYKYNF KVPSAWKGKK INIVFEGSMT DTEVKVNRKS
AGPTHQGSFY VFRYDVSSLL KYGSANLLEV KVAKHSANKS VNDAERKADF WIFGGIFRPV
YLEALPLQHI ERVAVDAQAD GRFKAEVQVV GKADELSLQL YTADGKQYGA PVSTRLNSKA
GMTSLSGIFQ SPQLWSSEFP NLYTATFTLY QNSKIIHTLS KKIGFRTILV KPRDGVYVNG
VKIKFKGVNR HSFRPASGRT LSKKNSVEDV ELMKEMNMNA VRMSHYPPDG HFLDVCDSLG
LYVMDELAGW HGHYDTPTGT KLVKEMLRHD VNHPSIIFWA NGNEGGHNRD LDPLFAKEDI
QKRPVIHPWE DFNGFDTQHY REYNYGIGNY RQGHSIQMPT EFLHGMFDGG HGANLEDYWN
DMLSNPLSAG GFLWDFADQG VVRTDKNNTI DADGNRGADG IVGPFHEKEG SYFAIKEIWS
PVFFEHREMT PEFDGVFNIE NRYHFANLNT CTFSWKLLNL KTGQEMSGRL ISPDVQPAAK
GRLQVNLPQN WFSFDVLYLT ATDLYGKELF TWSFPITLPK KEALTLVKTA GDKAVSFKES
DSLYTVSANG IQLSFSKKNG ILRQVRNEKG IIPFTNGPLV QEGATNFQNI RQYKDGENLV
IASTFDRKTA YNTLKWTIYP SGWVKLQVKY FPAEYLTNFI GLNFSFPEDQ IKGVEYMGRG
PYRVWKNRLK GNPFGVWKKD YNNTETGETW IYPEFKGYHS NMYWCKFITK EQPFKVVTEN
EDVFLRLFSA AFKTDQWHNY EPLFPSGDIS FMQGIPGIGT KTQRADRSGP MAMKNIFYDY
EKDPARALDL TLYFDFSVNN
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