Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5639 |
Symbol | |
ID | 3717472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6316963 |
End bp | 6318771 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | pyruvate carboxylase subunit B |
Protein accession | YP_351366 |
Protein GI | 77461859 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.509278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.279946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAA AGATTTTCGT AACCGACACC ATCCTGCGCG ACGCCCACCA ATCGCTGCTC GCCACCCGCA TGCGCACCGA AGACATGCTG CCGATCTGCG ACAAGCTCGA CAAAGTCGGC TACTGGTCGC TGGAATGCTG GGGCGGCGCG ACCTTCGACG CCTGCGTGCG TTTCCTGAAA GAAGACCCGT GGGAGCGTCT GCGCCAACTG CGCGCCGCGC TGCCCAACAC CCGTCTACAA ATGCTCCTGC GCGGGCAGAA CCTGCTGGGC TACCGCCACT ACAGCGATGA CGTGGTGAAG GCGTTCGTCG CCAAGGCCGC GGTCAACGGC ATCGACGTGT TCCGCATCTT CGACGCGATG AACGATGTGC GTAACCTGCG CGTGGCGATC GAAGCGGTGA AAGCTGCCGG CAAACACGCC CAGGGCACCA TCGCTTACAC CACCAGTCCG GTGCACACCA TCGACGCGTT CGTTGCCCAG GCCAAGCAAA TGGAAGCCAT GGGTTGCGAC TCGGTGGCGA TCAAGGACAT GGCCGGTCTG CTGACCCCGT ACGCGACCGG TGAGCTGGTG CGTGCACTGA AAGCCGAGCA GTCGCTGCCA GTGTTCATCC ACTCTCACGA CACCGCCGGC CTGGCAGCGA TGTGCCAGCT CAAGGCCATT GAAAACGGTG CCGACCACAT CGACACCGCG ATCTCCAGCT TCGCGTCGGG CACCAGTCAC CCTGGCACCG AATCGATGGT TGCTGCGCTG AAAGGCACCG AGTTCGACAC CGGTTTGAAT CTGGAGCTGC TGCAAGAGAT TGGCCTGTAC TTCTACGCCG TGCGCAAGAA GTACCACCAG TTCGAAAGCG AATTCACCGC CGTCGATACC CGTGTTCAAG TCAACCAGGT GCCGGGCGGG ATGATTTCCA ACCTGGCCAA CCAGTTGAAA GAGCAGGGCG CTCTGAACCG CATGGGCGAA GTGCTGGCGG AGATCCCGCG CGTACGTGAA GACCTCGGCT TCCCGCCGCT GGTGACCCCG ACTTCGCAGA TCGTCGGCAC CCAGGCGTTC TTCAACGTGT TGGCCGGCGA GCGCTACAAG ACCATCACCA ACGAAGTGAA GCTTTACCTG CAAGGCGGCT ACGGCAAGGC GCCGGGCACT GTGAACGAGA AGCTGCGTCG TCAGGCCATT GGCAGCGAAG AGGTGATCGA CGTACGCCCG GCCGATCTGC TCAAGCCGGA AATGACCAAG CTGCGTGCCG ATATCGGCGC ATTGGCCAAG TCCGAAGAAG ACGTGCTCAC CTTCGCCATG TTCCCGGACA TCGGCCGCAA GTTCCTCGAA GAGCGTGCCG CCGGCACTCT CACCCCGGAA GTGCTGCTGC CGATCCCGGA AGCGGGCAAG GTGGCTTCGG CCGGCGGCGA AGGCGTACCG ACCGAGTTCG TCATCGACGT TCACGGCGAG ACCTACCGTG TGGACATCAC CGGTGTCGGC GTCAAGGCTG AAGGCAAGCG TCACTTCTAC CTGTCCATCG ACGGCATGCC GGAAGAAGTG GTGTTCGAGC CGCTCAACGA ATTCGTCGGC GGCGGCAGCA GCAAGCGCAA GCAGGCTTCG GCACCGGGCC ACGTCAGCAC CACCATGCCG GGCAACATCG TCGATGTGCT GGTCAAGGAA GGCGACACCG TCAAGGCGGG CCAGGCCGTG CTGATCACCG AAGCGATGAA GATGGAGACC GAAGTCCAGG CCGCGATTGC CGGCAAGGTC ACCGCCATCC ACGTTGCCAA GGGCGACCGG GTCAACCCGG GCGAAATCCT GATCGAGATC GAAGGCTGA
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Protein sequence | MTKKIFVTDT ILRDAHQSLL ATRMRTEDML PICDKLDKVG YWSLECWGGA TFDACVRFLK EDPWERLRQL RAALPNTRLQ MLLRGQNLLG YRHYSDDVVK AFVAKAAVNG IDVFRIFDAM NDVRNLRVAI EAVKAAGKHA QGTIAYTTSP VHTIDAFVAQ AKQMEAMGCD SVAIKDMAGL LTPYATGELV RALKAEQSLP VFIHSHDTAG LAAMCQLKAI ENGADHIDTA ISSFASGTSH PGTESMVAAL KGTEFDTGLN LELLQEIGLY FYAVRKKYHQ FESEFTAVDT RVQVNQVPGG MISNLANQLK EQGALNRMGE VLAEIPRVRE DLGFPPLVTP TSQIVGTQAF FNVLAGERYK TITNEVKLYL QGGYGKAPGT VNEKLRRQAI GSEEVIDVRP ADLLKPEMTK LRADIGALAK SEEDVLTFAM FPDIGRKFLE ERAAGTLTPE VLLPIPEAGK VASAGGEGVP TEFVIDVHGE TYRVDITGVG VKAEGKRHFY LSIDGMPEEV VFEPLNEFVG GGSSKRKQAS APGHVSTTMP GNIVDVLVKE GDTVKAGQAV LITEAMKMET EVQAAIAGKV TAIHVAKGDR VNPGEILIEI EG
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