Gene Pfl01_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5306 
Symbol 
ID3715202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5973002 
End bp5973541 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID 
ProductCheW protein 
Protein accessionYP_351034 
Protein GI77461527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0138969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.218372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT CGCTGACCGC GTTCGAACTG TTGTGGCAGA TCGACCAGCG CTGTCGCCTA 
CTGGCGGCGG ACCTGCCGTC GCAACCGGCG CGCCAGGATC GCTGGAGCGG CATCGGCTTT
CGTCTGGGCG AGCACTGGTA CGTCACGCCG ATGGGCGAAG TCAGCGAAGT GCTGCCTGAA
CTGCGCGTCA CCCAGTTGCC GGGCGTCAAG CCTTGGGTCA AGGGCGTGGC CAATCTGCGC
GGACGGCTGC TGCCGGTCAT GGACCTGTGC GGCTTTTTCG GCCATGAGCT GTCACCGATG
CGCAAACAGC GGCGGGTATT GGTGGTAGAG CATCAGGATG TGTTTGCCGG GTTGCTGGTC
GATGAGGTCT TCGGCCTGCA GCACTTCGAG CAGGACAGTT TCGAACCCGT CTCGATCCGT
AAACGGCAAG GCTCCAAGGG CGAGTTCGTC AAAGGGTATT TCCGGCGCGA GCAGAACTGG
CGGGTGTTCA GCCTGTTTGC GCTGGCGCAG TCACCGAGTT TCATGCACGT CGCGGTTTAA
 
Protein sequence
MSESLTAFEL LWQIDQRCRL LAADLPSQPA RQDRWSGIGF RLGEHWYVTP MGEVSEVLPE 
LRVTQLPGVK PWVKGVANLR GRLLPVMDLC GFFGHELSPM RKQRRVLVVE HQDVFAGLLV
DEVFGLQHFE QDSFEPVSIR KRQGSKGEFV KGYFRREQNW RVFSLFALAQ SPSFMHVAV