Gene Pfl01_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5106 
Symbol 
ID3716446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5740317 
End bp5741105 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_350834 
Protein GI77461327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.311622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.753041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT ACGCTCTGAT CACCGGCGCC TCCAGCGGCA TCGGCCTGGC CATGGCCGAA 
GCCCTGGCAC GCCGTGGCCG CAGCCTGATT CTGGTAGCTC GCCAGCGTGA TCAGCTGGAA
AGCATTGCGA TTGAACTGAC CCAGCGCTTC GGTGTGGAGG TACTGTTCCG CGCCTGCGAT
CTCGGCGAGC CGCTGCGCCT GTCCGGTTTC CTGCTGGAGC TTGAAGAAGG CGACCGGCAG
ATCGATCTGC TGGTCAACTG TGCCGGCATC GGTACTTGCG GCCCGTTCCT GGCCCAGGAC
TGGATGACCG AACAGGACCT GATCGAAGTG AACATCCTCG CCCTCACCCG GCTCTGCCAT
GCCATCGGCA ACAGCATGGC GTTGCAGGGT GGCGGGCAGA TTCTCAATGT CGCGTCGGTG
GCGGCCTTCA ACCCCGGGCC CTGGATGAGC ACCTACTACG CCAGCAAGGC GTACGTGTTG
CACTTCTCGG AAGCACTGCG GGTGGAACTG AAGAAGTGTG CAGTCAAGGT GTCGGTGCTC
TGCCCCGGCC CGACCCGCAC CGCGTTCTTT CGCACCGCGC AACTGAACAA CGACAAGCTC
AACGCCAGCA AACTGTTGAT GAGCCCCGAG GAGGTCGCGC TGTATACCGT GCGCGCCCTG
GAGAAAAACC GCGCGATCAT CATTCCCGGA CGCCGAAACC GCTGGTTCGC CTTTCTGCCT
CGGCTCGGTT CGCGCTGGCT CAATCGCACG ATTGTCGGCA TGGTCAACAA GGCTTACTGC
CCGCGCTGA
 
Protein sequence
MTRYALITGA SSGIGLAMAE ALARRGRSLI LVARQRDQLE SIAIELTQRF GVEVLFRACD 
LGEPLRLSGF LLELEEGDRQ IDLLVNCAGI GTCGPFLAQD WMTEQDLIEV NILALTRLCH
AIGNSMALQG GGQILNVASV AAFNPGPWMS TYYASKAYVL HFSEALRVEL KKCAVKVSVL
CPGPTRTAFF RTAQLNNDKL NASKLLMSPE EVALYTVRAL EKNRAIIIPG RRNRWFAFLP
RLGSRWLNRT IVGMVNKAYC PR