Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5106 |
Symbol | |
ID | 3716446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5740317 |
End bp | 5741105 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_350834 |
Protein GI | 77461327 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.311622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.753041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT ACGCTCTGAT CACCGGCGCC TCCAGCGGCA TCGGCCTGGC CATGGCCGAA GCCCTGGCAC GCCGTGGCCG CAGCCTGATT CTGGTAGCTC GCCAGCGTGA TCAGCTGGAA AGCATTGCGA TTGAACTGAC CCAGCGCTTC GGTGTGGAGG TACTGTTCCG CGCCTGCGAT CTCGGCGAGC CGCTGCGCCT GTCCGGTTTC CTGCTGGAGC TTGAAGAAGG CGACCGGCAG ATCGATCTGC TGGTCAACTG TGCCGGCATC GGTACTTGCG GCCCGTTCCT GGCCCAGGAC TGGATGACCG AACAGGACCT GATCGAAGTG AACATCCTCG CCCTCACCCG GCTCTGCCAT GCCATCGGCA ACAGCATGGC GTTGCAGGGT GGCGGGCAGA TTCTCAATGT CGCGTCGGTG GCGGCCTTCA ACCCCGGGCC CTGGATGAGC ACCTACTACG CCAGCAAGGC GTACGTGTTG CACTTCTCGG AAGCACTGCG GGTGGAACTG AAGAAGTGTG CAGTCAAGGT GTCGGTGCTC TGCCCCGGCC CGACCCGCAC CGCGTTCTTT CGCACCGCGC AACTGAACAA CGACAAGCTC AACGCCAGCA AACTGTTGAT GAGCCCCGAG GAGGTCGCGC TGTATACCGT GCGCGCCCTG GAGAAAAACC GCGCGATCAT CATTCCCGGA CGCCGAAACC GCTGGTTCGC CTTTCTGCCT CGGCTCGGTT CGCGCTGGCT CAATCGCACG ATTGTCGGCA TGGTCAACAA GGCTTACTGC CCGCGCTGA
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Protein sequence | MTRYALITGA SSGIGLAMAE ALARRGRSLI LVARQRDQLE SIAIELTQRF GVEVLFRACD LGEPLRLSGF LLELEEGDRQ IDLLVNCAGI GTCGPFLAQD WMTEQDLIEV NILALTRLCH AIGNSMALQG GGQILNVASV AAFNPGPWMS TYYASKAYVL HFSEALRVEL KKCAVKVSVL CPGPTRTAFF RTAQLNNDKL NASKLLMSPE EVALYTVRAL EKNRAIIIPG RRNRWFAFLP RLGSRWLNRT IVGMVNKAYC PR
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