| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4970 |
|---|
| Symbol | |
|---|
| ID | 3715889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5598093 |
|---|
| End bp | 5599988 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_350698 |
|---|
| Protein GI | 77461191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.474352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC CGATCCGCAT CAAGGACCAC GAAAAAGACG CCCGTCTGGT GCGTGGTCGC
GTCGTGTTCG GCGCAATTGC GGTGGTGGCA CTGATCTGCG TGCTGATTGC GCGGCTGTAT
TACCTGCAGG TGATTCAGTA CGAATATCAC TCGACTCTGT CGGAAAACAA TCGGGTGCAT
GTCCAGCCGA TCCCGCCGAC CCGTGGCCTG ATTTTCGATC GCAACGGCGT GGTGGTGGCG
GACAACCGTC CGAGCTTCAG CCTGAGCATG ACCCGCGAGC GCTCCGGCGA CTGGCAGCAG
GTGCTCGACG TGATCGTCGA GGTGCTGGAG CTGACGCCGG AAGACCGGGT GATCTTCGAG
AAACGCATGC GCCAGGGCCG CCGGCCGTTC GAGCCGGTGC CGATCCTGTT CGAGCTGACC
GAAGAGCAGA TCGCCCGGAT CGCGGTGAAC CAGTTCCGTC TGCCGGGCGT CGAGGTGGTC
GCGCAACTGG TGCGTCATTA CCCGCAGGGC GCGCATTTCG CGCACTCGGT GGGTTACATG
GGGCGGATCA ACGAGAAAGA GCTGAAGACC CTCGATCCGG TCAATTACAG CGGTACCCAC
CACATCGGCA AGACCGGCAT CGAGCGCTTC TATGAAGCCG AGCTGCACGG TCAGGTGGGT
TACGAAGAGG TCGAGACCAA CGCCCGTGGC CGCGTCCTGC GCGTGCTCAA GCGTACCGAT
CCGGTGCCAG GCAAGGACAT TGTCCTGAGC CTCGACATCA AGTTGCAGGA AGCTGCCGAG
GCTGCGCTGG GCGGTCGGCG TGGCGCGGTG GTGGCGCTCG ATCCGAAAAC CGGCGAAGTG
CTGGCGATGG TCAGCCAGCC GAGCTTCGAC CCGAACCTGT TCGTCACCGG CATCAGCTTC
AAGGCCTACG CCGAGCTGCG CGATTCGATC GACCGGCCGC TGTTCAACCG CGTGCTGCGC
GGTCTGTACC CGCCGGGTTC GACGATCAAG CCGGCGGTGG CGATTGCCGG TCTCGATGCG
GGCGTGGTGA CGGCGTCGAG CCGGGTGTTC GACCCCGGTT ACTACATGCT GCCCAACTAC
GATCACAAGT ACCGCAACTG GAACCGCACC GGGGACGGCT TCGTCGACCT CGACACGGCG
ATCATGCGGT CCAACGACAC CTACTTCTAT GACCTGGCAC ACAAGCTGGG CATCGACCGG
TTGTCGGCCT ACATGAACAA GTTCGGCATC GGCCAGAAGG TCTCGCTGGA CATGTTCGAA
GAATCCCCCG GCCTGATGCC GTCCCGCGAG TGGAAACGCG CGACCCGGCG TCAGGCGTGG
TTCCCCGGCG AAACCCTGAT TCTCGGGATC GGCCAGGGCT ACATGCAATC GACCCCGCTG
CAACTGGCCC AGGCCACGGC GCTGGTGGCC AACAAGGGCG TGTGGAACCG CCCGCACCTG
GCCAAGACCA TCGAAGGCGA GAAACCGAAG GATGAAAACC CGATGCCGGA CATCATCCTG
CGCGACCCGT CCGACTGGAA CAAGGTCAAC CACGGCATGC AGCAGGTGAT GCACGGTGCC
CGCGGCACCG CGCGCAAGGC CTCGATCGGC GCGCAATACC GGATCGCCGG CAAGTCAGGT
ACGGCGCAGG TTGTGGCGAT CAAACAGGGC GAGAAGTACG ATCGTTCCAA GGTTCAGGAG
CGCCACCGCG ACCACGCCCT GTTTGTCGGT TTCGCGCCGG CGGATGACCC GAAAATCGTG
GTGTCGGTGA TGGTCGAGAA CGGTGAGTCC GGTTCCGGCG TCGCGGCACC GGTGGTGCGG
CAGGTCATGG ATGCCTGGCT GCTGGATCAG GACGGACGGT TGAAGGCCGA ATACGCCAGC
CCTATCAGTG CGGAGGCTAC GGCCCGTGAT GAATAA
|
|---|
| Protein sequence | MSQPIRIKDH EKDARLVRGR VVFGAIAVVA LICVLIARLY YLQVIQYEYH STLSENNRVH
VQPIPPTRGL IFDRNGVVVA DNRPSFSLSM TRERSGDWQQ VLDVIVEVLE LTPEDRVIFE
KRMRQGRRPF EPVPILFELT EEQIARIAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYM
GRINEKELKT LDPVNYSGTH HIGKTGIERF YEAELHGQVG YEEVETNARG RVLRVLKRTD
PVPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPKTGEV LAMVSQPSFD PNLFVTGISF
KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDA GVVTASSRVF DPGYYMLPNY
DHKYRNWNRT GDGFVDLDTA IMRSNDTYFY DLAHKLGIDR LSAYMNKFGI GQKVSLDMFE
ESPGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQSTPL QLAQATALVA NKGVWNRPHL
AKTIEGEKPK DENPMPDIIL RDPSDWNKVN HGMQQVMHGA RGTARKASIG AQYRIAGKSG
TAQVVAIKQG EKYDRSKVQE RHRDHALFVG FAPADDPKIV VSVMVENGES GSGVAAPVVR
QVMDAWLLDQ DGRLKAEYAS PISAEATARD E
|
|---|
| |