Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4964 |
Symbol | lipB |
ID | 3715883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5592575 |
End bp | 5593222 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | lipoate-protein ligase B |
Protein accession | YP_350692 |
Protein GI | 77461185 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGGCA CGCTGGGCTT TCGCGAGCTT GGCCAGATGG CTTACGAGCC GGTCTGGCAG GCCATGCAAC GTTTTACCAA CGAGCGTGGC ACCACGGCCC CGGACGAAAT CTGGCTGGTC GAACACCCGC CGGTGTTTAC CCAGGGCCAG GCCGGCAAGG CCGAGCACCT GTTGCTGCCG GGAGACATTC CGGTGGTGCA GGTCGACCGC GGCGGTCAGG TGACCTACCA TGGCCCAGGC CAGTTGGTAG CCTATCTGCT GCTGGATGTG CGCCGACTCG GTTTCGGCGT GCGCGATCTG GTCAGCCGCA TGGAGCGCTG CCTGATCGAA CTGCTGGCCA GCTACGGCGT GACCGCCGTG GCCAAGCCGG ATGCTCCCGG CGTCTACATC GACGGAGCGA AGATCGCTTC TCTGGGTTTG CGGATTCGCC ACGGTTGTTC CTTTCATGGC CTGGCCCTGA ACGTGGACAT GAACCTGGAA CCGTTTCGAC GGATTAATCC CTGCGGCTAT GCCGGGCTGG CGATGACCCA GCTGAGCGAG CACGCAGGAT CGATTGAATT TGCCGAGGTA AGTGCCCGGC TGCGCGCGCA GCTCGTCAAA CACCTCGACT ATGCTGAGCA GACGACCCTG ACGGGCGGAA TCGACTGA
|
Protein sequence | MPGTLGFREL GQMAYEPVWQ AMQRFTNERG TTAPDEIWLV EHPPVFTQGQ AGKAEHLLLP GDIPVVQVDR GGQVTYHGPG QLVAYLLLDV RRLGFGVRDL VSRMERCLIE LLASYGVTAV AKPDAPGVYI DGAKIASLGL RIRHGCSFHG LALNVDMNLE PFRRINPCGY AGLAMTQLSE HAGSIEFAEV SARLRAQLVK HLDYAEQTTL TGGID
|
| |