| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4400 |
|---|
| Symbol | |
|---|
| ID | 3713303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4961184 |
|---|
| End bp | 4962023 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_350128 |
|---|
| Protein GI | 77460621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.374202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.949799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGT GCCGTCGTGC TGTAACTGTT CTGGCTCTCA GCCTCGCGCC GCTTGCGGCG
TGGGCTGCGG TTCCTGTGGT CGATGACAAC TCCGGTTATA ACAATAGCGG GAGCAGTTAT
CCGCCTGCAG GTTACGGTAC GAACGGCGCC TATGCCGGGG GAGCGGCTTC GGCCCCTGCC
TCGGCACAAG GCATGCTGTT CAACCAACTG CAACAAATGC AGGATCAACT GTCGCGCCAG
CAAGGCGTGA TCGAAGAACT GCAGAACCAA GTTTCGCGCA TGAAGCAGGA ATCCCTGGAG
CGATACCAGG ATCTTGATCG GCGCATAGGA TCCGGCGTTG CACCTGCCGC GACTCCCGAG
AATTCTTCTG CCGGTGGCGA TGCAAGTGCT GCTGCCGGTG CCGCCGCTGG AGCCGGGGCT
GCTGCGGCCG CCCAGGCACC TGCCGCAGGT GGCGAACCGG CTGATCCGGC CAAGGAAAAG
CTGTATTACG ATGCAGCTTT CGACCTGATC AAGGCCAAGG ATTTCGACAA GGCCAGCCAA
GCGTTTGCCG CTTTCCTGCG TAAATACCCG AACAGCCAAT ACGCGGGCAA CGCCCAGTAC
TGGCTGGGTG AAGTGAACCT GGCCAAAGGC GATCTGCAAG GTGCAGGTCA GGCTTTCGCC
AAGGTTTCAC AGCTGTATCC CAAGCACGCC AAAGTGCCGG ATTCGCTGTA CAAGCTGGCT
GATGTAGAGC GTCGCCTCGG TCATACCGAC AAGGTCAAAG GCATTCTGCA GCAGGTGGTG
GCCCAATATC CGGGCACGTC CGCCGCTCAG TTGGCCCAGC GCGATCTGCA ACGCATGTAA
|
|---|
| Protein sequence | MRTCRRAVTV LALSLAPLAA WAAVPVVDDN SGYNNSGSSY PPAGYGTNGA YAGGAASAPA
SAQGMLFNQL QQMQDQLSRQ QGVIEELQNQ VSRMKQESLE RYQDLDRRIG SGVAPAATPE
NSSAGGDASA AAGAAAGAGA AAAAQAPAAG GEPADPAKEK LYYDAAFDLI KAKDFDKASQ
AFAAFLRKYP NSQYAGNAQY WLGEVNLAKG DLQGAGQAFA KVSQLYPKHA KVPDSLYKLA
DVERRLGHTD KVKGILQQVV AQYPGTSAAQ LAQRDLQRM
|
|---|
| |