Gene Pfl01_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0015 
Symbol 
ID3717583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp17178 
End bp18488 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content65% 
IMG OID 
ProductFmu, rRNA SAM-dependent methyltransferase 
Protein accessionYP_345748 
Protein GI77456243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0208773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC GTCTGGCCGC CGCCAAGGCA CTCGCCGCTG TTCTCAGTGG CAAGGCTTCG 
CTCAACAGCT CCCTGCCGAC GCAACTGGAC AAGGTCGAAG ATCGCGATCG CGGTTTCACC
CAGGACCTGG CGTTCGGCAC CGCCCGTTGG CAGCCACGTT TGTCGGCGCT GGCGGAAAAA
CTGCTGCAGA AGCCGTTCAA GGCAGCGGAC GCCGATGTCG AGGCATTGCT GCTGGTCGGT
CTCTATCAAC TGCTCTACAC CCGCGTCCCA CCGCACGCCG CCATCGGCGA AACCGTCGGT
TGCGCCGACA AGCTGAAAAA GCCGTGGGCC AAAGGCTTGC TCAACGCCGT ACTGCGCAAT
GCCCAGCGCG AACATGAGGC GATCTTCGCC GAACTGGAGC GCGATCCGGT GGTGCGTACT
GCCCACCCGC GCTGGCTGCA AAAATCCCTC AAGGCCTTCT GGCCTGAGCA ATGGGAAGCG
ATTTGCGAGG CCAACAACGC GCATCCGCCG ATGATCCTGC GGGTCAACCG TCGTCATCAC
AGCCGTGACG CGTACCTGGG TCTGCTGACT GAAGCCGGTA TCGCCGCGCA GCCGTGCACT
TTCAGCCGCG ACGGTATCGT GCTGGAGGCC GCCGCCGACG TGCGCAGCCT GCCGGGCTTC
GCCGAAGGCT GGATCAGCGT GCAAGACGAA GCCGCACAAC TGGCCGCCGA CCTGCTCGAC
CTCGCGCCGG GCCAGCGAGT GCTGGACGCC TGCTGTGCAC CGGGCGGCAA GACGTGCCAC
ATCCTCGAAG CCGAACCGGC ACTGGCCGGC GTGGTGGCGG TGGATCTGGA AGCCAAACGT
CTGGTGCGAG TGAAGGAAAA CCTCGAGCGT CTCGGTCTGA ACGCCGAACT GATCGCTGCC
GATGGTCGCG ACACGGCAGC CTGGTGGGAC GGCAAACCGT TCCAGCGCAT CCTGCTCGAC
GCGCCGTGCT CGGCCACCGG AGTAATCCGC CGTCACCCGG ACATCAAGCT GACCCGTCAG
GCCGACGACA TCGTTGCCCT CGCGCAACTG CAAGGCGAAC TGCTCGACGC GATGTGGAAA
ACCCTCGAAG TGGGCGGCAT CCTGCTCTAC GCCACCTGCT CGACCTTGCC GACCGAAAAT
ACCGAAGTCA TCGGCGCGTT TCTTGAGCGC ACGCCGGGCG CCCGGGAGCT GGATCTGGCT
ACCACCGCCG GGATCAAGCA GCCTCATGGT CGCCAATTGC TGGCCCAACA GGGCGGGCAT
GACGGGTTCT ACTACGCCAA GCTGATCAAG ATCGCTGCCG CGCGCGGCTA A
 
Protein sequence
MNPRLAAAKA LAAVLSGKAS LNSSLPTQLD KVEDRDRGFT QDLAFGTARW QPRLSALAEK 
LLQKPFKAAD ADVEALLLVG LYQLLYTRVP PHAAIGETVG CADKLKKPWA KGLLNAVLRN
AQREHEAIFA ELERDPVVRT AHPRWLQKSL KAFWPEQWEA ICEANNAHPP MILRVNRRHH
SRDAYLGLLT EAGIAAQPCT FSRDGIVLEA AADVRSLPGF AEGWISVQDE AAQLAADLLD
LAPGQRVLDA CCAPGGKTCH ILEAEPALAG VVAVDLEAKR LVRVKENLER LGLNAELIAA
DGRDTAAWWD GKPFQRILLD APCSATGVIR RHPDIKLTRQ ADDIVALAQL QGELLDAMWK
TLEVGGILLY ATCSTLPTEN TEVIGAFLER TPGARELDLA TTAGIKQPHG RQLLAQQGGH
DGFYYAKLIK IAAARG