Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3927 |
Symbol | |
ID | 8532353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4337055 |
End bp | 4337618 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | alkyl hydroperoxide reductase subunit C |
Protein accession | YP_003261265 |
Protein GI | 261823159 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGTAA TTAATACCCA AGTTAAACCA TTCAAAAACA TGGCTTTCAA AGACGGCCAA TTCATCGAAG TGACAGAGAA GAACATTGAA GGCAAATGGA GCGTGTTCTT CTTCTATCCG GCAGATTTTA CGTTTGTCTG CCCGACCGAA CTGGGTGATG TCGCTGACTA CTACGACGAA TTCCAACAGC GTGGCGTGGA AATTTACTCT GTTTCTACTG ACACCCACTT CACGCACAAA GCGTGGCACA GCAGCTCTGA AACGATTGGC AAAATCAAAT ACACCATGAT CGGTGACCCA ACTGGCCAGT TGACACGTAA TTTTGAAAAC ATGCGTGAAG CAGAAGGTCT GGCCGATCGC GGTACGTTCA TCGTTGACCC ACAGGGCATC ATTCAGGCGG TAGAAATCAC AGCTGAAGGT ATTGGCCGCG ATGCCTCTGA CCTGCTGCGC AAAGTCAAAG CCGCTCAATA CGTTGCATCT CACCCTGGCG AAGTATGCCC AGCTAAATGG AAAGAAGGCG AAGCCACGCT GGCCCCGTCT CTGGATCTGG TTGGTAAAAT CTAA
|
Protein sequence | MSVINTQVKP FKNMAFKDGQ FIEVTEKNIE GKWSVFFFYP ADFTFVCPTE LGDVADYYDE FQQRGVEIYS VSTDTHFTHK AWHSSSETIG KIKYTMIGDP TGQLTRNFEN MREAEGLADR GTFIVDPQGI IQAVEITAEG IGRDASDLLR KVKAAQYVAS HPGEVCPAKW KEGEATLAPS LDLVGKI
|
| |