Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3241 |
Symbol | |
ID | 8531656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3538038 |
End bp | 3539234 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003260590 |
Protein GI | 261822484 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA ACAGAGGGCT AACGCCTCTG GCGGCAGTTC TGATGCTTTC TGGCGGCTTA ATGCTCGCAG GATGTGATAG CGGCAACAAT CAGCAGGACG GCGGCGCACA GCAGCAGATG CCTGAAGTGG GTATTGTTAC GTTGAAAACA GAAGCACTGA ATGTCATGAC CGAACTGCCG GGCCGTACAA GTGCTTACCG CATTGCTGAG GTTCGCCCAC AGGTTGGCGG AATTATCCTA AAACGCAACT TCGTTGAAGG ATCTGACGTT AAAGCTGGCG CATCACTGTA TCAGATCGAT CCTGCAACCT ATCAGGCGAA CTACAACAGC GCCAAAGGTT CACTTGCTCA AGCTCAGGCT CAGGCAGAAA TTGCACACCT GACGGTTAAC CGCTATAAAC CGCTGCTGGG CACCAACTAC GTCAGCAAGC AAGATTACGA TCAGGCTGTC GCTACTTCCC GTCAGGCTGA TGCTGCTGTT TTGGCAGCCA AAGCGGCAGT AGACACCGCA CAAATCAATC TGGCTTACAC CAAAGTCAAT TCACCAATCG AAGGCCGCGT AGGAAGATCA ACGGTAACGG AAGGCGCATT GGTGGGAACC GGGCAAGCAA CGGCATTAAC AACCGTGCAA CAACTTGATC CGGTCTATGT TGATGTCACT CAATCCAGTA ATGATTTTCT GCAACTGAAA AAAGAGCTGG AAAACGGCAC GTTAAAACAA AATCAAGGCA AAGCGAATGT CCGTCTGCTG TTAGAAAATG GTACTGAGTA TGCAGAAGCA GGTACATTGG AATTCTCTGA TGTTACGGTA GATGAAACCA CAGGTTCCAT CACGCTGCGC GCCATTTTCC CTAACCCACA GCACAACCTG CTGCCAGGTA TGTTTGTACG TGCTCGCCTC GATTCCGGCG TTAACCCGAC GGCCTTATTA GTGCCGCAGC AAGGTGTCAC CCGCGATCCG CGCGGTCAGG CCACGGCGAT GGTGGTTGGG GAAGGCGATA AAGTAGAGCC GCGTTCGCTT AAAACCGGTA AAGCAATTGG TGACAAATGG TTGGTTACCG AAGGCTTGAA AGCAGGTGAC CGCGTTATTC TCACTGGTCT GCAAAAAATC AGACCCGGTG CGCAGGTGAA AACTAAAGAA GTCGCTCCAG AAAATCAGCA GGCGCAGCAA GCGTCAGCAG AACCCGCGAA GTCTTAA
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Protein sequence | MNKNRGLTPL AAVLMLSGGL MLAGCDSGNN QQDGGAQQQM PEVGIVTLKT EALNVMTELP GRTSAYRIAE VRPQVGGIIL KRNFVEGSDV KAGASLYQID PATYQANYNS AKGSLAQAQA QAEIAHLTVN RYKPLLGTNY VSKQDYDQAV ATSRQADAAV LAAKAAVDTA QINLAYTKVN SPIEGRVGRS TVTEGALVGT GQATALTTVQ QLDPVYVDVT QSSNDFLQLK KELENGTLKQ NQGKANVRLL LENGTEYAEA GTLEFSDVTV DETTGSITLR AIFPNPQHNL LPGMFVRARL DSGVNPTALL VPQQGVTRDP RGQATAMVVG EGDKVEPRSL KTGKAIGDKW LVTEGLKAGD RVILTGLQKI RPGAQVKTKE VAPENQQAQQ ASAEPAKS
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