Gene Pden_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2899 
Symbol 
ID4581466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp60834 
End bp61391 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content72% 
IMG OID639770226 
ProductHK97 family phage prohead protease 
Protein accessionYP_916679 
Protein GI119385624 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.575479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAA AGGAGGCTGA GGTGAGTTTG AAGGATTACG GGCTGGAGCT GAAATATGCC 
GCCGGCGGGT CGCTGGTGGC CGAGGGCACG CGGATCGAGG GCTATGCCAG CCTGTTCGGA
ATGTCCGACC AGGGCGGCGA CGTCGTGGTC CGGGGCGCCT ATGCCGCCAG CCTGAAGCGG
CTGGCGGCGC GGGGCGACCG GGTGCGGATG CTGTGGCAGC ACGATCCCGC CCGGCCCATC
GGCGTCTGGG AGGAAATCCG CGAGGACGGC AAGGGGCTGT GGGTCAGGGG GCGGCTGCTG
CCCGAGATCG CCCAGGCCCG CGAGGCGGCG GCGCTGGTCG CCGCCGGCGC CATCGACGGG
CTGTCCATCG GCTATCGCAC CATCGCGGCC GAGCGCGACG GCAAGGGCCG GCGGCTCTTG
TCCGAGGTCG AGCTGTGGGA GGTGTCGCTG GTGACGTTCC CGATGCTGGC CGAGGCCAGG
GTCGGCACGA AATCCGATGC CGGCCACGAG ATGGCGGCGG CCTTTCGGGC CGCGACGCTG
GCGCTGCGCG CCAAGTGA
 
Protein sequence
MRRKEAEVSL KDYGLELKYA AGGSLVAEGT RIEGYASLFG MSDQGGDVVV RGAYAASLKR 
LAARGDRVRM LWQHDPARPI GVWEEIREDG KGLWVRGRLL PEIAQAREAA ALVAAGAIDG
LSIGYRTIAA ERDGKGRRLL SEVELWEVSL VTFPMLAEAR VGTKSDAGHE MAAAFRAATL
ALRAK