Gene Pden_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1987 
Symbol 
ID4581145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1990702 
End bp1991643 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content67% 
IMG OID639769315 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_915775 
Protein GI119384719 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.804808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA TCACCAACTA TGTCCGTCCG CGCATCAATT CGCTGTTCTC GCGCCGCGAG 
GTGCCCGAGA ACCTGTGGAC GAAATGCCCG GAATGCGGGA CCATGCTGTT CCACCGCGAG
TTGTCGGACA ACCTGAACGT CTGCACGAAT TGCGACCATC ACCTGGCGAT CAGCCCCCGG
CAGCGCTTTG CCGCGCTGTT CGACGGCGGC GTCTTCAACG AGGTCAAGGT GCCCGAGCCG
GTCGCCGACC CCTTGGGCTT TCGCGACCAG AAGAAATATC CCGACCGCAT GAAGGCGGCG
CAGAAATCCA CCGGCGAGAA AGAGGCGATG CTGGTCGCCG AGGGCGAGAT CGGCCGCACC
CCCATCGTCG CCGCCGCGCA GGATTTTTCC TTCATGGGCG GCTCGATGGG CATGTATGTC
GGCAACGCCA TCATCGCCGC GGCCGAGCGC GCGGTGAAGC TCAAGCGCCC GCTGGTGCTG
TTCTCGGCCG CCGGCGGCGC GCGCATGCAG GAGGGCATCC TGTCGCTGAT GCAGATGCCC
CGCACCACCG TCGCCGTCGA GATGCTGAAA GAGGCGCGGC TGCCCTATAT CGTCGTGCTG
ACCCATCCGA CCACCGGGGG CGTGACCGCC AGCTATGCCA TGCTGGGCGA CATCCAGATT
TCCGAGCCGA ACGCGCTGAT CTGCTTTGCC GGCCCGCGCG TGATCGAGCA GACCATCCGC
GAAAAGCTGC CCGAGGGCTT CCAGCGCGCC GAATACCTGC TGGAACACGG CATGCTGGAC
CGGGTGACGC ATCGCAAGAA ACTGCGCGAG GAACTCGTCT CGATCCTGCG CATGCTGGGG
GGCCTGCCCG CGCCGGTGGC CGGCGACCTG CCCGCGCCGG GTCCGACCGC AACCGCCCGG
TCCGAAGCCG ACGAGACCCC GGCCGACAGC ACATCCGCCT GA
 
Protein sequence
MNWITNYVRP RINSLFSRRE VPENLWTKCP ECGTMLFHRE LSDNLNVCTN CDHHLAISPR 
QRFAALFDGG VFNEVKVPEP VADPLGFRDQ KKYPDRMKAA QKSTGEKEAM LVAEGEIGRT
PIVAAAQDFS FMGGSMGMYV GNAIIAAAER AVKLKRPLVL FSAAGGARMQ EGILSLMQMP
RTTVAVEMLK EARLPYIVVL THPTTGGVTA SYAMLGDIQI SEPNALICFA GPRVIEQTIR
EKLPEGFQRA EYLLEHGMLD RVTHRKKLRE ELVSILRMLG GLPAPVAGDL PAPGPTATAR
SEADETPADS TSA