Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0809 |
Symbol | |
ID | 4580555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 783068 |
End bp | 783979 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639768128 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_914617 |
Protein GI | 119383561 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTC TGGTCCTGAC CCTTGTCGCC GTGTTGGCCG CCACCGCGGC CCCCGCCTAT GAGGCGGTGG ATGCGCTTCT GGGGCTGCGC GCCCCGCGCC CGTCCAAGAC GCTGCGCTGC ACCGACGACG GGCTTTATTG CATCTCGCTT GCGAGCTATG TGCCCGATGT CTGCTCGGCC ATCGAGCGGG CGGCGGGGAA GAACGGGCTG GACCCGCATT TCTTCGCCAG GCTCTTGTGG AAGGAAAGCC TGTTCGAGCC GGGCGCGATC AGCCCGGTCG GCGCCATGGG CATCGCGCAA TTCATGCCCG GCACCGCCGA GATGGTCGGG CTGGACGATC CCTTCAACCC GGCCAAGGCC ATCGAGGCCT CGGCGCGCTA TCTGGCGACG CTGACCGCGA GCTTTGGCAA TGTGGGCCTT GCCGCCGTCG CCTATAACGG CGGCGAGAAC CGGGCCGCGC GCTTCGTCTC GCAAAATGGC GGCCTGCCAT GGGAGACGCA GGATTATGTC CAGGCGATCA CCGGCCAGAC GGCCTGGATC TGGCGCGACA CCCCTCCGGC CCGGCTGGAT GTGCGGCTGG ACAAGGAGCG GCCCTTCCGC GACGCCTGCA TCGAGCTGGC CGGCAAGCGC AAGCTGCGCG AGTTCCAGAC CCCCGAGCAT CCCTGGCCCT GGGGCGTGAT CGTCGCCACC CATCCCAGCC ATTCCGGCGT CAGCCAGCAA GTCGCGCGGC TGAACCGGCA ATTGCGGCCG ATCCTGGGCG GCAAGCGCGT GAGCTACGTG CATCGCAAGG TCTCGGGCGG GCCGCGCAAG CTTTATACCG CGCAGATCGG CTATTCGTCG AAGGCCGAGG CCCACGCATT CTGCAACCGG CTGCGCGGCC TGGGCGGGCG CTGCCTCGTG CTGAAGAACT GA
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Protein sequence | MRRLVLTLVA VLAATAAPAY EAVDALLGLR APRPSKTLRC TDDGLYCISL ASYVPDVCSA IERAAGKNGL DPHFFARLLW KESLFEPGAI SPVGAMGIAQ FMPGTAEMVG LDDPFNPAKA IEASARYLAT LTASFGNVGL AAVAYNGGEN RAARFVSQNG GLPWETQDYV QAITGQTAWI WRDTPPARLD VRLDKERPFR DACIELAGKR KLREFQTPEH PWPWGVIVAT HPSHSGVSQQ VARLNRQLRP ILGGKRVSYV HRKVSGGPRK LYTAQIGYSS KAEAHAFCNR LRGLGGRCLV LKN
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