Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_2262 |
Symbol | hflK |
ID | 3724954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2641452 |
End bp | 2642453 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637751863 |
Product | HflK protein |
Protein accession | YP_357671 |
Protein GI | 77919856 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000000015812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATCTC GATACCCGGG CGATGACCTG CAAAATCTGG CCAAACGCCT CAAACAAAAC CAGCCCCTGC CGCGACTGAT TGTTATCGCG GCGGCCACCC TGCTGGTATT GATCGGACTG TCCAGCAGTT TCTACAAAGT AGAGACGGAA GAAACCGGTG TCGTGCTACG GTTTGGCCGG TTCAGCGGAT TTTCCGAACC GGGCCTGCAC ATCAAGATTC CGTTTGGAGT CGACCGGATA TACAAGGCTA AAACCGGGCG CGTGCTCAAG GAGGAATTCG GCTTTCGCAC CCTTCAGGCC GGAGTGCGCA CCACCTATAG CAAGAGAAAT CTCGAAGACG AATCCCTGAC CCTGACCGGC GACCTTAACG TCAGCGACGT CGAATGGATC GTCCAGTACC AGATCTCAGA TCCCTTCAAG TACCTGTTCC GCATTCACAA TCCGGAAGGA ACCATTCGCG ATCTGTCCGA AGCGGTGGTG CGCAAGGTGG TAGGTAACTC AAATGTCTCC GAAGTACTCA CCACGGAACG AGCCGTGCTG GCCAACAGCA TCCAGACGGA CCTGCAGGAG ATCCTCAACA GCTACGACAT CGGCGTACGC ATCGTCACCG TCAAGTTCCA GGACGTCAAC CCGCCCGATC CAGTCAAGGC AGCCTTCAAC GAAGTCAACG AAGCCGAACA GCAGAAAGAA AGCCTGATCT TTCAGGCACG GGAGCAATAC AACCGCGAGG TCCCCAAAGC CCGCGGGGTA GCACGTCGCA CCATCCAGGA AGCGGAAGGA TATGCGGTGG AGCGCATCAA CAAGGCCCGC GGCGAAACGA GCCGTTTTCT GGACCTGCTC GCCGAATACC GCAAGGCGCC GGACGTCACC CGCCAGCGGC TCTATCTGGA AACCCTGGAA AAGGTACTGC CCAACCTTGA GGAGATCTAT ATCATGGACC GTGACGGTGC CGGAACCCTG CCCCTGCTCC CCCTGCGCGC TGACAAAAAA GGAGGCCAGT AA
|
Protein sequence | MPSRYPGDDL QNLAKRLKQN QPLPRLIVIA AATLLVLIGL SSSFYKVETE ETGVVLRFGR FSGFSEPGLH IKIPFGVDRI YKAKTGRVLK EEFGFRTLQA GVRTTYSKRN LEDESLTLTG DLNVSDVEWI VQYQISDPFK YLFRIHNPEG TIRDLSEAVV RKVVGNSNVS EVLTTERAVL ANSIQTDLQE ILNSYDIGVR IVTVKFQDVN PPDPVKAAFN EVNEAEQQKE SLIFQAREQY NREVPKARGV ARRTIQEAEG YAVERINKAR GETSRFLDLL AEYRKAPDVT RQRLYLETLE KVLPNLEEIY IMDRDGAGTL PLLPLRADKK GGQ
|
| |