Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0436 |
Symbol | |
ID | 3723149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 530052 |
End bp | 530633 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637750022 |
Product | TetR/AcrR family transcriptional regulator |
Protein accession | YP_355866 |
Protein GI | 77918051 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00014648 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC GTGACACCCG TGAACATATT CTCCGGATCG GTATGGACCT TATGGCCCGA CAGGGTTATG GCGCCACCGG TATCGGCGCC ATACTGAGCC GGGCGGAAGT GCCCAAGGGG TCATTTTATC ACTATTTCCC CAGCAAGGAG GCTTTTGGCC TGGCGATCAT CGACCGCTTT GCCCATCGTT ACGAAGAAAA ACTCCTGGCT TTTTTGCGCG ATGACAAACT TGCGCCACTC GAGCGCATTC GCGCCTATCT CGATGCCATT GCCCAGCGGC TCGATAACGG GGGGTGCGAT CGGGGGTGTC TGGCGGGAAA TCTGGGGCAG GAACTCGCCG CCTGCAATCA AACCTTTCGT CGCCGTCTGC AACATCTTTT CGACAGCTGG CAGGAGCATC TCGCCAACTG CCTTGCCGCC GCTCAGGCGC ATGGCCATAT GTCCGCGGAT ATCAGCAGCA GTCAATTGGC CGGGGTGGTC CTCAACGGCC TTGAGGGTGC CATCCTGCGG GCCAAGGTGC AGTGTTCAGC CGAGCCGGTG CGAGAATTTA TAGACGTGCT CTTTTCGCGG CTGTTGCGGT AG
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Protein sequence | MEKRDTREHI LRIGMDLMAR QGYGATGIGA ILSRAEVPKG SFYHYFPSKE AFGLAIIDRF AHRYEEKLLA FLRDDKLAPL ERIRAYLDAI AQRLDNGGCD RGCLAGNLGQ ELAACNQTFR RRLQHLFDSW QEHLANCLAA AQAHGHMSAD ISSSQLAGVV LNGLEGAILR AKVQCSAEPV REFIDVLFSR LLR
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