Gene Pcar_0099 details

Gene Information

• Locus tag: Pcar_0099
• Symbol: uvrB
• ID: 3722894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 118811
• End bp: 120814
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637749678
• Product: excinuclease ABC subunit B
• Protein accession: YP_355532
• Protein GI: 77917717
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 68
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAAT TCAATCTTAA ATCGAATTAC CAGCCGCGGG GCGATCAGCC ACAGGCCATC 
GAAGAACTGT CGACCGGATT GCAGCGTGGC GACAAACACC AGGTGTTGCT CGGCGTCACC 
GGTTCGGGCA AGACCTTCAC CATGGCAAAC GTCGTGGCAC AGGTGCAACG CCCCACCCTG 
GTCCTCGCCC ACAACAAAAC CCTGGCGGCA CAGCTGTACG GCGAGTTCAA GGAGCTGTTT 
CCGGACAATG CCGTCGAGTA CTTCGTCTCC TACTACGACT ACTACCAGCC CGAAGCCTAC 
GTACCGACCA CCGACACCTT CATCGAAAAA GATTCCTCCA TCAATGAAGA GATCGACAAG 
ATGCGCCACA GCGCCACGCG CAGCCTGCTC AGCCGCAACG ACGTGCTGAT CGTCTCGTCG 
GTATCCTGCA TCTACGGTCT CGGTTCCCCT GAAGCTTATT ACGGCATGCT TATCCGCCTG 
GAAACTGGCA TGCAGCTTGA CCGCAATGCC TTACTCAAAA ACCTGGTGGA GATTCAGTAC 
GATCGCAACG ATGTCGACTT TCACCGCGGT ACTTTCCGGG TGCGTGGCGA CACGGTGGAA 
ATCTTCCCGG CCTACGAAGA AAAACGCGCC CTGCGCATCG AGTTTTTCGG CGACGAAATC 
GATGCCATTT GCGAAATCGA TCCGCTGCGC GGCAAAGTAC TCGACCGTTT GGAGCGCACT 
GCAGTCTTTC CCGCCAGTCA TTACGTGGCC ACCCGCCCAA CCCTCGATCG CGCTATTCGC 
GAGATCCAGG ACGAGTTGCG TGAACGTCTC ACCTGGTTCC GGGAAAACAA CATGCTGCTG 
GAGGCGCAAC GCATTGAGCA ACGGACCATG TTCGACATCG AAATGATCGA AGAGATGGGC 
TACTGCCAGG GAATAGAGAA CTATTCACGG TTCCTGGACG GACGCCAGGC CGGCCAGCCG 
CCCGCCACCC TGTTCGACTA CTTCCCCGAC GATGCACTTC TGTTCATCGA CGAGTCCCAC 
GTCACCGTCT CGCAGATCGG TGCCATGTAC CGAGGCGACC GCTCGCGCAA AGAGACCCTG 
GTACGCTACG GCTTTCGCAT GCCGTCAGCC CTCGATAACC GTCCCTTGAC CTTTGAGGAA 
TTCGAAGCCA AGGGCATTCA GACCATCTAT GTCTCGGCAA CCCCGGCCGA CTACGAATTG 
CGCAAGGCCG ATGGCGTGGT GGTCGAGCAG ATCATTCGCC CCACCGGGCT GCTCGACCCG 
CCCATCGATG TAAGACCGGC CAAAGATCAG GTCGACGACC TTATTCACGA AATACGCCTC 
ACCATCAAAC AGAACGAAAG AGTCCTGGTC ACCACCCTTA CCAAGCGCAT GGCCGAGGAA 
CTCACCGGCT ACCTTGGTGA ACTCGGCATA AAGGTGCGGT ATCTGCACTC CGATATCGAT 
ACCGTGGAAC GTATGCAGAT CCTGCGCGAG CTGCGCGAGG GGCTGTTCGA TGTGCTGGTT 
GGCATCAACC TGCTGCGCGA GGGGCTCGAT ATCCCCGAGG TATCGCTGGT CGCCATTCTG 
GATGCGGATA AAGAGGGCTT TTTACGCTCC GAACGGTCGC TGATCCAGAC TTGCGGGCGC 
GCCGCGCGGA ATGTCGCCGG CCGGGTCATC ATGTACGCCG ACCGGATCAC CCGCTCCATG 
CGCGCCTGCC TCGATGAAAC CGAACGACGC CGCACAGCCC AGTTGGCTTA CAACGAAGAG 
CACGGCATCA CTCCGCAGAC CGTCAAGAAA TCACTGCGCT CGATCCTCGA AGATATAGCC 
GAAAAGGACT ATGTGGAACT GCCGCAGGTC GCCGAAGAGC TTGGCGACTA TCACACACCT 
CAGGATGTCA AAAACGAAAT CGCCCGGGTT AAGGAGGAAA TGCTGGCTGC GGCGGCCAAT 
CTGGAGTTTG AAAAAGCTGC GGAGCTGCGC GACCGCATGC TGGAGTTGGA TAAACTGGAG 
CTGTCCATCC GAAACGTAAA GTAG 

 

Protein sequence

MAKFNLKSNY QPRGDQPQAI EELSTGLQRG DKHQVLLGVT GSGKTFTMAN VVAQVQRPTL 
VLAHNKTLAA QLYGEFKELF PDNAVEYFVS YYDYYQPEAY VPTTDTFIEK DSSINEEIDK 
MRHSATRSLL SRNDVLIVSS VSCIYGLGSP EAYYGMLIRL ETGMQLDRNA LLKNLVEIQY 
DRNDVDFHRG TFRVRGDTVE IFPAYEEKRA LRIEFFGDEI DAICEIDPLR GKVLDRLERT 
AVFPASHYVA TRPTLDRAIR EIQDELRERL TWFRENNMLL EAQRIEQRTM FDIEMIEEMG 
YCQGIENYSR FLDGRQAGQP PATLFDYFPD DALLFIDESH VTVSQIGAMY RGDRSRKETL 
VRYGFRMPSA LDNRPLTFEE FEAKGIQTIY VSATPADYEL RKADGVVVEQ IIRPTGLLDP 
PIDVRPAKDQ VDDLIHEIRL TIKQNERVLV TTLTKRMAEE LTGYLGELGI KVRYLHSDID 
TVERMQILRE LREGLFDVLV GINLLREGLD IPEVSLVAIL DADKEGFLRS ERSLIQTCGR 
AARNVAGRVI MYADRITRSM RACLDETERR RTAQLAYNEE HGITPQTVKK SLRSILEDIA 
EKDYVELPQV AEELGDYHTP QDVKNEIARV KEEMLAAAAN LEFEKAAELR DRMLELDKLE 
LSIRNVK