| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0088 |
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| Symbol | pdxA |
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| ID | 3722883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 104081 |
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| End bp | 105085 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637749667 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_355521 |
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| Protein GI | 77917706 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.00976639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAAAC CCCTGATCCT TACCATGGGC GACCCGACCG GGGTCGGCCC CGAAGTCATC
CTCAAAGCCT GGCTCAGTGG CGCCCTCGAC GGTGTCAAAC GCCCCCTGCT GGTCGCCGGC
GATACTGCGG TGCTGCAACG CGCGGCTCAC CTGCTGCAAG CGGATTGCAC TACCGGCGAA
ATCGCCGATG GCCTGGCTAC ACACATGCTG CAAGCCGGTA ATCGCCGCCT TGCAGTGCGT
TCCCTGTCGA ACCTGCCGGC CCCACAACTG AGCTGGGGGC ACCCTGACGC CCATTGCGGC
AAAGCCATGC TGGACTACAT AAACTGGGCC TGCGACCAGT GCCTGAAGGG TACGGCCGCT
GCCATGGTTA CCGGCCCCAT CAACAAACAG GCCATCCTGG CCGCCGGCTG CGACGCGCCC
GGACATACCG AACTGCTGGC CCGGCGCTGC CGAACCGACA AGGTCGTCAT GATGCTTGGC
GGGGCACACC TCAAAGTCTG TCTGGTCACC ACCCATCTGC CATTAAAAGA GGTTCCCGAC
ACCCTCACCA CCGAGGACAT CGTCGCCACC ATACGCATTA CCGACAGCGC TTTCCGTCGT
TTTTTCGGCT GTCGGAATCC GCGTCTGGCG GTACTGGCCC TCAATCCCCA CGCCGGTGAA
GGCGGCCGTT TCGGCGATGA GGAAGAGCGT ATCATCGCTC CCGCCATCGC CGCGGCTCGC
CAATGCGGTA TCAACGCCAG CGGTCCCCAC AGTGCCGATG CCCTGTTTCA TTTTGCCGCC
CGGGGCGATT ACGACGCCGT GGTCTGCATG TACCATGACC AGGGGCTGAT TCCTCTGAAA
CTGTTGCACT TCGAGGACGG CGTCAACGTA ACTCTGGGGC TGCCCATCAT CCGCACCTCC
GTCGATCACG GCACCGCCTA CGATCTGGCC GGTACCGGCA AAGCGGACTG CAGCAGCCTC
GTCGCCGCCG TGACCATGGC GGCGCAGATG GCTGAAAAGC AGTGA
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| Protein sequence | MHKPLILTMG DPTGVGPEVI LKAWLSGALD GVKRPLLVAG DTAVLQRAAH LLQADCTTGE
IADGLATHML QAGNRRLAVR SLSNLPAPQL SWGHPDAHCG KAMLDYINWA CDQCLKGTAA
AMVTGPINKQ AILAAGCDAP GHTELLARRC RTDKVVMMLG GAHLKVCLVT THLPLKEVPD
TLTTEDIVAT IRITDSAFRR FFGCRNPRLA VLALNPHAGE GGRFGDEEER IIAPAIAAAR
QCGINASGPH SADALFHFAA RGDYDAVVCM YHDQGLIPLK LLHFEDGVNV TLGLPIIRTS
VDHGTAYDLA GTGKADCSSL VAAVTMAAQM AEKQ
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