Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0071 |
Symbol | |
ID | 3722866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 86795 |
End bp | 87673 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637749650 |
Product | putative transcriptional regulator LysR-type |
Protein accession | YP_355504 |
Protein GI | 77917689 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000000120497 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGATA TGGATTCCAA CGCGTTGAAA ATTTTTTTGG CGGTTGCCGA GGAGGGGAGT GTCTCCAGGG CCGCCGAGCG TTTGCACTGC GTGCAGTCGA ATGTCACCAC GCGTATTCGT AAACTTGAAG CGGATTTGGG GGCAGAGCTG TTTCACCGCA CGCGCAAGGG GATGGGGCTC TCTGCCGCCG GTCATCTTCT GTTGCCCTAC GCACGCTCCG TCACACATCT GCTGCATGAA GCGCGGGCGG CCCTCGACCC TTCCAGCGCG CCGTGTGGGC CTTTGCGCCT CGGTGCCATG GATACGGCGG CCGTGGTGCA CCTTCCGGCG TTACTGGCGG GTTATCACCG GGAATATCCG GACGTCGATC TGCAATTGAG CACCGGCGCC AGCGGCGAAA TGGTCCAGCG GGTGCTCGAT TACTCGTTGG AGGGCGCTTT TGTCGGTGGC CGCGTAGAGC ATCCTGACAT TGTAGCAGAA GAAGTGCTGT GCGAAGAGCT GGTCATGGTG ACCAGTAGTA CCGAACCTGT CGTGGATGAG GAGTCGGTAT TGTCGGTACT GGTCTATCGC AGAGGCTGTT CCTGTCGCCG CAAGCTCGAA GAATGGCTTA AACACACGAG GCGTACGCCT TCCCGGGTGG TGGAAATGGG AGCCCTCGAT GCCATCCTCG GTTGCGTCGG CGCCGGCATG GGGATCACCA TGCTGCCCCG CAGTTTCGTA ACGCGCGAAC CTTTCCGCTC TCTGGTGCAT ATTCATGCCG TAGCGCCGCC CTTCGATCGC CTGCCGATTC AACTGATTCG CCGTCGCGAT GTGCAGCCTT CGTCGGCCAT GCATTCTTTT CTCGGGATGG CGCGCGAAAC TCTGGCTGCC AAATCTTGA
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Protein sequence | MDDMDSNALK IFLAVAEEGS VSRAAERLHC VQSNVTTRIR KLEADLGAEL FHRTRKGMGL SAAGHLLLPY ARSVTHLLHE ARAALDPSSA PCGPLRLGAM DTAAVVHLPA LLAGYHREYP DVDLQLSTGA SGEMVQRVLD YSLEGAFVGG RVEHPDIVAE EVLCEELVMV TSSTEPVVDE ESVLSVLVYR RGCSCRRKLE EWLKHTRRTP SRVVEMGALD AILGCVGAGM GITMLPRSFV TREPFRSLVH IHAVAPPFDR LPIQLIRRRD VQPSSAMHSF LGMARETLAA KS
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