Gene Pcal_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1515 
Symbol 
ID4909139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1415325 
End bp1416482 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID640125264 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001056400 
Protein GI126460122 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000511206 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGCGTCGAG TTATCTCGTT GGAGAACGGC GTCAGGCTCG TTGTTGATAA GTTTGACTCA 
CCGTTGGCGG CTGTTGTGAC GTCGGTGGGG GTTGGGTCGC TCTTCGAGCC GCGGGAGGCG
CGGGGGGTGA CGCATTTGTT GGAGCACCTC TCGTTTAGGG TGCCGGGCTT CGACGTGGAT
ATGGCTGTGG AATCTCTCGG GGGTAGCTGT AACGCGTATA CGCACAGGGA CTTCGTGGCG
TTTGTCTTTG AGGGGCTTGG GGGCTCTGCC GTGGGCCTCG TGGAGCTGGC CTACCGCATC
TACGCCAATG GGAGGTACGA GGCGGCTGAC TTTGAGAGAG AGCGGGACGT GGTTCTCTCG
GAGTTGCGCA TGTCGCGGGA GGACCCGTCG GAGCGGGTGG GGGACCTAGT AGTGAGAGCG
CTTTTCGGGG ACTCGGACTG GGGGGCGCCG GTGGGCGGGA CGCCGGAGAC TGTGGGCTCC
CTCTCGCTGG GGGACGTGGT TGAGCACAAG GAGAGGTGGT TCACCCCCGA CAACACCGTG
GTGGTGCTCT CGGGGGGCTT CTCCGACGAG GCTGTGGAGA GGGCCGCCTC TCTCTTCGGC
TCGTTGGAGG GGGCGGCGCC GCGCAAGGGA GACCCCTCGG AGGGGGTTGG GCCTGGGTTT
GTGGAAGAGG TGGGGGAGGT GGATGGGGTG TACTACGCCA GGGCGGTTAG GCTGGCCGTG
GACAGCCCCC CGGCCGCGTA CGCCCTCCTC CACGGCGCGG CTTTCCACTT GGAGACTGGG
ACTAAGTCTA TACTCTTCAA CGTGGTGAGG GACAGGGGCG TGGCGTATTC CTTCTACGTG
GATTTCGACG TGGTGGGGCA GGTGGCCTAC CTAGCCGTGG TGGTGGAGTC GGCGAGGTCT
CTCGGCGACG CCAGGACTGC GGTGGCCGAG GCGCTGAAGC CGAGAGAGCC GCCGGAGTAC
AGGATGCGGT TCTACGACTA CCTCATGTCC AGCACACTGC GCTCGCCCGC CGGCCGCGCC
CTGGCCTTGG CTGAGTACAT GGCGAAGGGT GGCCGGCCCG AGGCCATGGA GGAGGAGCTG
AGGAGGGCCG CAGAGAGGGG CACCGAGTGG ATGCCGCCAT ACGTGGTCAG AGAGGCCGAG
GCGGTGGTAC ACGGCTAG
 
Protein sequence
MRRVISLENG VRLVVDKFDS PLAAVVTSVG VGSLFEPREA RGVTHLLEHL SFRVPGFDVD 
MAVESLGGSC NAYTHRDFVA FVFEGLGGSA VGLVELAYRI YANGRYEAAD FERERDVVLS
ELRMSREDPS ERVGDLVVRA LFGDSDWGAP VGGTPETVGS LSLGDVVEHK ERWFTPDNTV
VVLSGGFSDE AVERAASLFG SLEGAAPRKG DPSEGVGPGF VEEVGEVDGV YYARAVRLAV
DSPPAAYALL HGAAFHLETG TKSILFNVVR DRGVAYSFYV DFDVVGQVAY LAVVVESARS
LGDARTAVAE ALKPREPPEY RMRFYDYLMS STLRSPAGRA LALAEYMAKG GRPEAMEEEL
RRAAERGTEW MPPYVVREAE AVVHG