Gene Patl_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3913 
Symbol 
ID4175693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4719461 
End bp4720165 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content41% 
IMG OID638056941 
Producthypothetical protein 
Protein accessionYP_663467 
Protein GI109900212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000317623 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAAAA GTATCCTAAC CAATGTAGTT GCCCTGTTGT TACTTATTCT GGGTTTGGTG 
TTAGAAAATC TGATTATTAC TACTGTCGGT ATCTTTGCTT TGTCTGGTGC AATCACCAAT
TGGCTGGCGA TACACATGTT GTTTGAAAAA GTGCCGCTTT TATACGGCTC AGGTGTTATT
CCGTCACGTT TTGAAGAGTT TAAAGCAGGA ATACGAGAAC TGATGATGAC GCAGTTTTTC
ACTGAGCAAA ACATTGCGCG CTTCCTAAAC AGTGATAATC AGCAACTTAA GATTGATTTA
GCCCCAGTGT TAGAAAAGGT CGATTTAGAG CCTACGTTTG ACTCATTGGT CGAAGTTATT
AATGCGTCTT CATTTGGCAG TATGCTAGGT ATGTTCGGTG GCGCAGAAGC CCTTACTCCG
CTGAAACAAC CCTTTGTGGA GAAAATGAAA ACCTCCCTGA TTGAAATAAG CCAAGATGAG
CGCTTTCTGG AAACGTTAAG CAATCAGTTT GAACAGCCAA ATGTGATGCA TGACGTGCAA
CAGAAAATTG AATCGATTGT TGAGCAGCGC TTAGATGAAC TTACCCCTAA AATGGTCAAA
AATATTATTC AAGCCATGAT CAAGAAACAT TTAGGTTGGT TGGTTGTATG GGGTGGTGTT
TTTGGTGGCC TTATCGGTTT AGTAACGATT TTAGTCGCTT CATAA
 
Protein sequence
MNKSILTNVV ALLLLILGLV LENLIITTVG IFALSGAITN WLAIHMLFEK VPLLYGSGVI 
PSRFEEFKAG IRELMMTQFF TEQNIARFLN SDNQQLKIDL APVLEKVDLE PTFDSLVEVI
NASSFGSMLG MFGGAEALTP LKQPFVEKMK TSLIEISQDE RFLETLSNQF EQPNVMHDVQ
QKIESIVEQR LDELTPKMVK NIIQAMIKKH LGWLVVWGGV FGGLIGLVTI LVAS