| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2794 |
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| Symbol | |
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| ID | 4174554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3394112 |
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| End bp | 3394822 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055811 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_662359 |
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| Protein GI | 109899104 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00556903 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATA AGGCACAGAG TCCAGCCGGA TTTGCCGAAG AGTATATAGT TGAATCTATA
TGGAGCGGTC GCTTCCCTCC CGGTACCATA CTTCCTGCAG AGCGTGAACT ATCAGAATTA
ATTGGGGTAA CTCGAACAAC ATTACGTGAA GTACTGCAGC GCTTAGCGCG AGACGGTTGG
TTGACTATTC AACATGGTAA GCCGACTAAA GTGAATAACT TCTGGGAAAC CTCAGGTCTG
AACATCTTAG AAACCTTGGC TCGTTTAGAC GAAGATGGGA TTTCAGAGCT AGTGGATCAT
CTGTTGGCGG CGCGCACTAA CTTAAGTGCA GTATTTATTC GTGGGGCGAT CCGCAACAAC
CAAGAAAAAA CCATTGAAAT TCTGCAGCAA TATAAAGAAG TAGAGCAAGA CGGAACTGCA
TTTGCTGTTA AAGATTATCA ATTAAATCAT GACTTGGCCT TTGCATCTGG AAACCCTGTA
TACGTGCTAA TGATGAATGG CTTTAAAGGT TTGTATTCAC GTATCGGTGG TTACTACTTC
TCTAATGAGA AATCTCGGGC GCTGACCCAT GATTACTACC AGCAATTGCT CGCGCTTGCT
GAAAAAGGTG ATTACGAAAG CGTGTTGTTA GTCATTCGCA ATTACGGTAT CGCCAGCGGT
AAGTTGTGGA ACGAGATGCG TGATGAGATG CCCAAGGGCT TAGTTGACTA G
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| Protein sequence | MIYKAQSPAG FAEEYIVESI WSGRFPPGTI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTK VNNFWETSGL NILETLARLD EDGISELVDH LLAARTNLSA VFIRGAIRNN
QEKTIEILQQ YKEVEQDGTA FAVKDYQLNH DLAFASGNPV YVLMMNGFKG LYSRIGGYYF
SNEKSRALTH DYYQQLLALA EKGDYESVLL VIRNYGIASG KLWNEMRDEM PKGLVD
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